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S35_SO-1_scaffold_213040

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_213040_1
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3..251)
DNA (249bp) protein (83aa)
Tax=AR11
S35_SO-1_scaffold_213040_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


380..913
DNA (534bp) protein (178aa)
50S ribosomal protein L10e id=5800536 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L10e
Tax=AR11
S35_SO-1_scaffold_213040_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

939..1997
DNA (1059bp) protein (353aa)
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003804E87
MscS mechanosensitive ion channel
Tax=CG_Pacearch_06
S35_SO-1_scaffold_213040_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1999..4539)
DNA (2541bp) protein (847aa)
PGAP1 family protein id=5799748 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PGAP1 family protein
Tax=AR11
S35_SO-1_scaffold_213040_5

Not on your lists

4766..6487
DNA (1722bp) protein (574aa)
Kef-type K+ transport system, predicted NAD-binding component n=1 Tax=Herbaspirillum sp. CF444 RepID=J3DJL0_9BURK
Monovalent cation:H+ antiporter-2, CPA2 family {ECO:0000313|EMBL:KHO51145.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
sodium/hydrogen exchanger
S35_SO-1_scaffold_213040_6
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists


6529..7122
DNA (594bp) protein (198aa)
SSU ribosomal protein S6E id=5799714 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ribosomal protein S6e
Tax=GWA2_WOR_2_47_8_curated
S35_SO-1_scaffold_213040_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


7429..8709
DNA (1281bp) protein (427aa)
Translation initiation factor 2 subunit gamma id=5800779 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
translation initiation factor IF-2
Tax=AR11
S35_SO-1_scaffold_213040_8
unknown

Not on your lists

comp(8711..9007)
DNA (297bp) protein (99aa)

This feature has no annotations

S35_SO-1_scaffold_213040_9
unknown

Not on your lists

9121..9420
DNA (300bp) protein (100aa)

This feature has no annotations

S35_SO-1_scaffold_213040_10
RIFOXYA2_FULL_WOR_1_51_19_curated, WOR-1, Bacteria

Not on your lists

comp(9500..10027)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F706F
adenine phosphoribosyltransferase
Tax=RIFOXYA2_FULL_WOR_1_51_19_curated
S35_SO-1_scaffold_213040_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10141..11196
DNA (1056bp) protein (352aa)
translation initiation factor, aIF-2BI family (EC:5.3.1.23)
Putative methylthioribose-1-phosphate isomerase id=3633231 bin=GWF2_OP9-related_38_17 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
Tax=GWF2_RBX1_38_17_curated
S35_SO-1_scaffold_213040_12
R_Nitrospirae_40_19, Nitrospirae, Bacteria

Not on your lists

11222..12031
DNA (810bp) protein (270aa)
DhnA-type fructose-1,6-bisphosphate aldolase (EC:4.2.1.-)
Fructose-bisphosphate aldolase id=1873959 bin=GWB2_Nitrospirae_rel_47_37 species=Thermoplasmatales archaeon SCGC AB-539-N05 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
S35_SO-1_scaffold_213040_13
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

12073..13098
DNA (1026bp) protein (342aa)
Alcohol dehydrogenase id=4127511 bin=GWF2_Nitrospirae_44_13 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
theronine dehydrogenase-like Zn-dependent dehydrogenase
Tax=GWF2_Nitrospirae_44_13_curated
S35_SO-1_scaffold_213040_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(13099..13839)
DNA (741bp) protein (247aa)
S-methyl-5'-thioadenosine phosphorylase id=2100959 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=Mammalia phylum=Chordata tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
5'-deoxy-5'-methylthioadenosine phosphorylase
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_213040_15

Not on your lists

comp(13896..14447)
DNA (552bp) protein (184aa)
ZPR1-like zinc finger protein; K06874 zinc finger protein id=5049199 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Zinc finger protein {ECO:0000313|EMBL:KHO45190.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ZPR1-like protein zinc finger protein
S35_SO-1_scaffold_213040_16
unknown

Not on your lists

comp(14533..15324)
DNA (792bp) protein (264aa)

This feature has no annotations

S35_SO-1_scaffold_213040_17

Not on your lists

comp(15365..15787)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377C38B
Uncharacterized protein {ECO:0000313|EMBL:KHO51871.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein
S35_SO-1_scaffold_213040_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


16008..16298
DNA (291bp) protein (97aa)
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e id=5051516 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L21e
Tax=CG_Woesearch_02
S35_SO-1_scaffold_213040_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

16298..16645
DNA (348bp) protein (116aa)
RNA polymerase II, Rpb4 id=5799707 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_213040_20
unknown

Not on your lists

16677..17594
DNA (918bp) protein (306aa)
id=1835647 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
S35_SO-1_scaffold_213040_21
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

17613..18182
DNA (570bp) protein (190aa)
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_213040_22
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

18193..18420
DNA (228bp) protein (76aa)
Conserved hypothetical membrane protein, peptidase family M50 n=1 Tax=uncultured archaeon RepID=D1JE55_9ARCH id=5103755 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved hypothetical membrane protein, peptidase family M50
Tax=AR20
Displaying 22 items

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