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S36_SO-2_scaffold_36773

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_36773_1
Thermoproteus uzoniensis, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(78..476)
DNA (399bp) protein (133aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=999630 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus uzoniensis (strain 768-20).;"
Putative uncharacterized protein n=1 Tax=Pyrobaculum sp. 1860 RepID=G7VFA7_9CREN
PilT protein domain-containing protein
S36_SO-2_scaffold_36773_2
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(476..700)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S052_THEPD
Uncharacterized protein {ECO:0000313|EMBL:ABL78832.1}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain Hrk 5).;"
S36_SO-2_scaffold_36773_3
unknown

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comp(1144..1542)
DNA (399bp) protein (133aa)

This feature has no annotations

S36_SO-2_scaffold_36773_4
RBG_16_Archaea_50_20_curated, Archaea

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comp(2165..2581)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JDX3_9ARCH
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
S36_SO-2_scaffold_36773_5
unknown

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comp(2571..2768)
DNA (198bp) protein (66aa)

This feature has no annotations

S36_SO-2_scaffold_36773_6
unknown

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comp(3070..3849)
DNA (780bp) protein (260aa)

This feature has no annotations

S36_SO-2_scaffold_36773_7
Campylobacter showae, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(3846..4292)
DNA (447bp) protein (149aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=1073353 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter showae CC57C.;"
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Campylobacter showae CC57C RepID=M3GZ61_9PROT
cell division
S36_SO-2_scaffold_36773_8
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4289..4843)
DNA (555bp) protein (185aa)
Phosphoheptose isomerase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B532_9ARCH
phosphoheptose isomerase
Phosphoheptose isomerase {ECO:0000313|EMBL:AFS80010.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
S36_SO-2_scaffold_36773_9
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

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comp(4833..5831)
DNA (999bp) protein (333aa)
D-glycero-D-manno-heptose 7-phosphate kinase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3H1_9ARCH
D-glycero-D-manno-heptose 7-phosphate kinase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
S36_SO-2_scaffold_36773_10

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comp(5821..6531)
DNA (711bp) protein (237aa)
Glucose-1-phosphate thymidylyltransferase protein {ECO:0000313|EMBL:KFM20091.1}; EC=2.7.7.23 {ECO:0000313|EMBL:KFM20091.1};; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11.;"
dTDP-glucose pyrophosphorylase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D8H6_9EURY
nucleotidyl transferase
S36_SO-2_scaffold_36773_11
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(6652..7068)
DNA (417bp) protein (139aa)
Hypothetical conserved protein id=3647714 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
Tax=RBG_13_Bathyarchaeota_52_12_curated
S36_SO-2_scaffold_36773_12
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(7047..7304)
DNA (258bp) protein (86aa)
Tax=RBG_13_Bathyarchaeota_52_12_curated
S36_SO-2_scaffold_36773_13
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(7950..8492)
DNA (543bp) protein (181aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
S36_SO-2_scaffold_36773_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(8489..8764)
DNA (276bp) protein (92aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
S36_SO-2_scaffold_36773_15

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comp(9009..9407)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAN5_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39165.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
S36_SO-2_scaffold_36773_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(9404..9664)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAN4_9ARCH
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
S36_SO-2_scaffold_36773_17
unknown

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comp(9924..10112)
DNA (189bp) protein (63aa)

This feature has no annotations

S36_SO-2_scaffold_36773_18

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10231..12027
DNA (1797bp) protein (599aa)
Quinoprotein alcohol dehydrogenase PPQ-dependent protein n=1 Tax=uncultured archaeon W5-61a RepID=H9BX90_9ARCH
Quinoprotein alcohol dehydrogenase PPQ-dependent protein {ECO:0000313|EMBL:AFD03412.1}; TaxID=1131008 species="Archaea; environmental samples.;" source="uncultured archaeon W5-61a.;"
quinoprotein alcohol dehydrogenase
S36_SO-2_scaffold_36773_19
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

12185..12937
DNA (753bp) protein (251aa)
FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE41_NITGG
Tax=RBG_16_Thaumarchaeota_49_8_curated
S36_SO-2_scaffold_36773_20
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

Not on your lists

comp(12934..13971)
DNA (1038bp) protein (346aa)
Glycerol-1-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015263}; Short=G1P dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497};; Short=G1PDH {ECO:0000256|HAMAP-Rule:MF_00497};; EC=1.1.1.261 {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015268};; Enantiomeric glycerophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00497}; sn-glycerol-1-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8G15 RepID=B3TAT2_9ARCH
putative NAD(P)-dependent glycerol-1-phosphate dehydrogenase
S36_SO-2_scaffold_36773_21
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14041..14739
DNA (699bp) protein (233aa)
Translation initiation factor 6 n=1 Tax=uncultured crenarchaeote RepID=Q702B7_9CREN
translation initiation factor 6 (aeIF-6)
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
S36_SO-2_scaffold_36773_22

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14772..15212
DNA (441bp) protein (147aa)
Prefoldin subunit alpha n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID92_NITGG
Prefoldin, alpha subunit (PfdA, PFDN5) {ECO:0000313|EMBL:AIE95857.1}; TaxID=1455934 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_70_G10.;"
prefoldin subunit alpha
S36_SO-2_scaffold_36773_23
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15212..16138
DNA (927bp) protein (309aa)
Signal recognition particle receptor FtsY n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHF3_NITGG
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S36_SO-2_scaffold_36773_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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16151..17095
DNA (945bp) protein (315aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Ornithine carbamoyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH0_NITGG
S36_SO-2_scaffold_36773_25

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comp(17072..17359)
DNA (288bp) protein (96aa)
Endonuclease V family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IA96_ACIB4
Methylated-DNA/protein-cysteinemethyltransferase {ECO:0000313|EMBL:KKS32454.1}; TaxID=1618926 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_12.;"
methylated-DNA/protein-cysteine methyltransferase
S36_SO-2_scaffold_36773_26
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(17401..18159)
DNA (759bp) protein (253aa)
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
Putative D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL02_NITGG
Tax=RBG_16_Thaumarchaeota_49_8_curated
S36_SO-2_scaffold_36773_27
RBG_16_Archaea_50_20_curated, Archaea

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18368..19417
DNA (1050bp) protein (350aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
3-methyl-2-oxobutanoate dehydrogenase subunit alpha id=14624941 bin=bin5_DeltaP species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=RBG_16_Archaea_50_20_curated
S36_SO-2_scaffold_36773_28

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comp(19478..20746)
DNA (1269bp) protein (423aa)
FAD dependent oxidoreductase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GEF7_9FIRM
Dehydrogenase (FixC) {ECO:0000313|EMBL:AIF20581.1}; TaxID=1456344 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_90_G11.;"
oxidoreductase FixC
S36_SO-2_scaffold_36773_29
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(20802..21083)
DNA (282bp) protein (94aa)
Elongation factor 1-beta n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6F7_METEZ
translation elongation factor aEF-1 beta
Tax=RBG_16_Thaumarchaeota_49_8_curated
S36_SO-2_scaffold_36773_30
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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21544..21867
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YK88_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:EAW38427.1}; TaxID=313612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya aestuarii (strain CCY9616)).;"
hypothetical protein
Displaying items 1-30 of 39 in total

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