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S36_SO-2_scaffold_125484

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_125484_1

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1..318
DNA (318bp) protein (106aa)
Integrase/recombinase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E858_9EURY
Marine sediment metagenome DNA, contig: S06H3_C02858 {ECO:0000313|EMBL:GAH96910.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S36_SO-2_scaffold_125484_2
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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393..851
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI0003750231
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIR97196.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
S36_SO-2_scaffold_125484_3
unknown

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comp(1456..1884)
DNA (429bp) protein (143aa)

This feature has no annotations

S36_SO-2_scaffold_125484_4
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2315..2725
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EK17_9CHLR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
S36_SO-2_scaffold_125484_5
Pseudomonas sp. CMR12a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2976..3332
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CMR12a RepID=H9NJ33_9PSED
Uncharacterized protein {ECO:0000313|EMBL:AFF59665.1}; TaxID=658629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CMR12a.;"
S36_SO-2_scaffold_125484_6
unknown

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comp(3451..3645)
DNA (195bp) protein (65aa)

This feature has no annotations

S36_SO-2_scaffold_125484_7
unknown

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comp(3670..4044)
DNA (375bp) protein (125aa)

This feature has no annotations

S36_SO-2_scaffold_125484_8
unknown

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4394..4624
DNA (231bp) protein (77aa)

This feature has no annotations

S36_SO-2_scaffold_125484_trna_3
unknown

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comp(4578..4651)
DNA (74bp)
transferRNA Gly
S36_SO-2_scaffold_125484_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(4923..5819)
DNA (897bp) protein (299aa)
Ribose-phosphate pyrophosphokinase n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TEM6_THEC1
ribose-phosphate pyrophosphokinase
Tax=RBG_16_Archaea_50_20_curated
S36_SO-2_scaffold_125484_10
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(5845..6819)
DNA (975bp) protein (325aa)
Translation initiation factor, aIF-2BII family {ECO:0000313|EMBL:EHP84221.1}; EC=5.3.1.23 {ECO:0000313|EMBL:EHP84221.1};; TaxID=647171 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris formicicus Mc-S-70.;"
Translation initiation factor, aIF-2BII family n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L110_9EURY
translation initiation factor, aIF-2BII family
S36_SO-2_scaffold_125484_11
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

7099..7932
DNA (834bp) protein (278aa)
Transketolase domain protein n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T4D8_THEIA
transketolase
Tax=CG_Elusi_03
S36_SO-2_scaffold_125484_12
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7929..8894
DNA (966bp) protein (322aa)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GIQ5_9FIRM
transketolase
Transketolase {ECO:0000313|EMBL:AHF08237.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallireducens DSM 15288.;"
S36_SO-2_scaffold_125484_13
CG_Micra_02, Micraarchaeota, Archaea

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9424..10656
DNA (1233bp) protein (411aa)
HlyC/CorC-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ69_NITGG
HlyC/CorC-like protein
Tax=CG_Micra_02
S36_SO-2_scaffold_125484_14

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10871..11548
DNA (678bp) protein (226aa)
transaldolase (EC:2.2.1.2)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1502293 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-N04.;"
Probable transaldolase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=TAL_NITMS
S36_SO-2_scaffold_125484_15

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11568..12518
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI0003826F96
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AIF12093.1}; TaxID=1456191 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_54_F04.;"
galE6; UDP-glucose 4-epimerase
S36_SO-2_scaffold_125484_16
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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12673..14190
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZX5_9BACT
Protein of unknown function (DUF1800)
Uncharacterized protein {ECO:0000313|EMBL:CCW36692.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
S36_SO-2_scaffold_125484_17
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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14196..15425
DNA (1230bp) protein (410aa)
hypothetical protein id=14630941 bin=bin9_gal15 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=CSP1_3_Armatimonadetes
S36_SO-2_scaffold_125484_18

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comp(15536..15964)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI00037AD98A
Uncharacterized protein {ECO:0000313|EMBL:KKM77110.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S36_SO-2_scaffold_125484_19

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comp(15957..16217)
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM77111.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transcription regulator SpoVT/AbrB family
S36_SO-2_scaffold_125484_trna_2
unknown

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comp(16296..16367)
DNA (72bp)
transferRNA Ala
S36_SO-2_scaffold_125484_20
unknown

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comp(16459..17514)
DNA (1056bp) protein (352aa)

This feature has no annotations

S36_SO-2_scaffold_125484_21

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18003..20306
DNA (2304bp) protein (768aa)
Alcohol dehydrogenase (Acceptor) (Gcd) {ECO:0000313|EMBL:AIF20598.1}; EC=1.1.5.2 {ECO:0000313|EMBL:AIF20598.1};; TaxID=1456345 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_90_H07.;"
quinoprotein alcohol dehydrogenase (EC:1.1.99.8)
Quinoprotein alcohol dehydrogenase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4G7_9ARCH
S36_SO-2_scaffold_125484_22
unknown

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comp(20524..20886)
DNA (363bp) protein (121aa)

This feature has no annotations

S36_SO-2_scaffold_125484_23
unknown

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21149..21367
DNA (219bp) protein (73aa)

This feature has no annotations

S36_SO-2_scaffold_125484_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21528..23078)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBT7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58736.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S36_SO-2_scaffold_125484_25
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(23113..23865)
DNA (753bp) protein (251aa)
GCN5-related N-acetyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TSY4_9CHLR
Acetyltransferase (GNAT) domain
Tax=RBG_16_Thaumarchaeota_49_8_curated
S36_SO-2_scaffold_125484_26
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(23862..25064)
DNA (1203bp) protein (401aa)
Cysteine--tRNA ligase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L5G4_KORCO
cysteinyl-tRNA synthetase
Tax=RBG_13_Bathyarchaeota_38_9_curated
S36_SO-2_scaffold_125484_27
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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25325..26257
DNA (933bp) protein (311aa)
Isoaspartyl aminopeptidase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LM74_THEBM
isoaspartyl aminopeptidase
Isoaspartyl aminopeptidase {ECO:0000313|EMBL:ADT83921.1}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (strain DSM 11836 / MP).;"
S36_SO-2_scaffold_125484_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(26380..27621)
DNA (1242bp) protein (414aa)
ABC efflux transporter, FtsX-domain permease protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILC9_NITGG
ABC efflux transporter, FtsX-domain permease
ABC efflux transporter, FtsX-domain permease protein {ECO:0000313|EMBL:AFU59432.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying items 1-30 of 59 in total

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