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S36_SO-2_scaffold_109407

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_109407_1

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2..664
DNA (663bp) protein (221aa)
Cobalt/nickel ABC transporter permease n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8Z5_9ARCH
Cobalt transport protein (CbiQ) {ECO:0000313|EMBL:AIF19388.1}; TaxID=1456322 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_86_F11.;"
cobalt/nickel ABC transporter permease
S36_SO-2_scaffold_109407_2
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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683..1366
DNA (684bp) protein (228aa)
ERCC4 domain protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2ELD3_9ARCH
ERCC4 domain protein {ECO:0000313|EMBL:EPA05402.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
ERCC4 domain protein
S36_SO-2_scaffold_109407_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1349..1720)
DNA (372bp) protein (124aa)
translation initiation factor SUI1 id=14427661 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
translation initiation factor SUI1
Tax=CSP1_1_Thaumarchaeota
S36_SO-2_scaffold_109407_4
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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1789..2046
DNA (258bp) protein (86aa)
Putative uncharacterized protein id=4994000 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
S36_SO-2_scaffold_109407_trna_1
unknown

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2090..2192
DNA (103bp)
transferRNA Met
S36_SO-2_scaffold_109407_5
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2534..2962)
DNA (429bp) protein (143aa)
UspA domain-containing protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0S1_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:EHQ36214.1}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
universal stress protein UspA-like protein
S36_SO-2_scaffold_109407_6
unknown

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comp(3094..3210)
DNA (117bp) protein (39aa)

This feature has no annotations

S36_SO-2_scaffold_109407_7
GWA2_Deltaproteobacteria_55_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3207..4385)
DNA (1179bp) protein (393aa)
MFS transporter family protein id=2244733 bin=GWB2_Proteobacteria_55_19 species=Chlorobaculum tepidum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
major facilitator superfamily protein
Tax=GWA2_Deltaproteobacteria_55_10_curated
S36_SO-2_scaffold_109407_8
unknown

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comp(4395..4598)
DNA (204bp) protein (68aa)

This feature has no annotations

S36_SO-2_scaffold_109407_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4982..5662
DNA (681bp) protein (227aa)
Putative nucleotidyl transferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN35_NITGG
Nucleoside-diphosphate-sugar pyrophosphorylase family protein
Putative nucleotidyl transferase {ECO:0000313|EMBL:AFU58684.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S36_SO-2_scaffold_109407_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5659..6930)
DNA (1272bp) protein (424aa)
UDP-glucose/GDP-mannose family dehydrogenase (EC:1.1.1.-)
UDP-glucose/GDP-mannose family dehydrogenase {ECO:0000313|EMBL:AFU59464.1}; EC=1.1.1.- {ECO:0000313|EMBL:AFU59464.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
UDP-glucose/GDP-mannose family dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INJ1_NITGG
Displaying 11 items

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