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S36_SO-2_scaffold_160867

Search features with annotation key words

Displaying items 1-30 of 248 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_160867_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1..681
DNA (681bp) protein (227aa)
argC; N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosph ate reductase (EC:1.2.1.38 1.2.1.-)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INT1_NITGG
S36_SO-2_scaffold_160867_2
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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686..1492
DNA (807bp) protein (269aa)
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKQ9_NITGG
Tax=RBG_16_Thaumarchaeota_49_8_curated
S36_SO-2_scaffold_160867_3
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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1614..2678
DNA (1065bp) protein (355aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
Acetylornithine aminotransferase n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E6K1_9ARCH
argD; transaminase, acetylornithine/succinylornithine family
S36_SO-2_scaffold_160867_4
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2807..3865
DNA (1059bp) protein (353aa)
Pectinesterase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WB92_9CYAN
pectinesterase
Pectinesterase {ECO:0000313|EMBL:AFZ17635.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
S36_SO-2_scaffold_160867_5
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(3936..4217)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID22_NITGG
Protein of unknown function (DUF552)
Tax=RBG_16_Thaumarchaeota_49_8_curated
S36_SO-2_scaffold_160867_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4311..4793)
DNA (483bp) protein (161aa)
Putative PUA domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFN5_NITGG
PUA domain-containing protein
Putative PUA domain-containing protein {ECO:0000313|EMBL:AFU58625.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S36_SO-2_scaffold_160867_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4887..5117
DNA (231bp) protein (77aa)
Putative small nuclear ribonucleoprotein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH49_NITGG
Small nuclear ribonucleoprotein, LSM family
Putative small nuclear ribonucleoprotein {ECO:0000313|EMBL:AFU59195.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S36_SO-2_scaffold_160867_8
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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5370..5999
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJB4_NITGG
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
S36_SO-2_scaffold_160867_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6001..6681
DNA (681bp) protein (227aa)
rpiA2; ribose-5-phosphate isomerase A (EC:5.3.1.6)
ribose 5-phosphate isomerase id=14427562 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
S36_SO-2_scaffold_160867_10
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6704..7588)
DNA (885bp) protein (295aa)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU34_9ARCH
5-carboxymethyl-2-hydroxymuconate delta-isomerase
5-carboxymethyl-2-hydroxymuconate delta-isomerase {ECO:0000313|EMBL:AJM91926.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
S36_SO-2_scaffold_160867_11
unknown

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7650..8066
DNA (417bp) protein (139aa)

This feature has no annotations

S36_SO-2_scaffold_160867_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8076..8471
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037BDCE9
pyridoxamine 5'-phosphate oxidase FMN-binding protein
Putative pyridoxamine 5'-phosphate oxidase FMN-binding protein {ECO:0000313|EMBL:AFU58750.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S36_SO-2_scaffold_160867_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8615..9250)
DNA (636bp) protein (212aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=uncultured marine crenarchaeote AD1000-325-A12 RepID=B3V5P9_9ARCH
S36_SO-2_scaffold_160867_14
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9268..9891)
DNA (624bp) protein (208aa)
Putative adenosylcobinamide-phosphate guanylyltransferase CobY {ECO:0000313|EMBL:AKB84345.1}; EC=2.7.7.62 {ECO:0000313|EMBL:AKB84345.1};; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
NTP:adenosylcobinamide-phosphate nucleotidyltransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UA9_METBU
nucleotidyltransferase
S36_SO-2_scaffold_160867_15
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9888..10640)
DNA (753bp) protein (251aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
cobS; Cobalamin synthase (EC:2.-.-.-)
Cobalamin synthase n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KLG1_9ARCH
S36_SO-2_scaffold_160867_16
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(10664..11605)
DNA (942bp) protein (314aa)
Probable cobalamin biosynthesis protein CobD n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T4Y1_9EURY
cobalamin biosynthesis protein CobD
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
S36_SO-2_scaffold_160867_17
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11617..13131)
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037DA2CF
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila TM-1.;"
cobyric acid synthase
S36_SO-2_scaffold_160867_18
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13182..14276)
DNA (1095bp) protein (365aa)
hisC; histidinol-phosphate transaminase (EC:2.6.1.9)
Aminotransferase class I and II n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLG5_9ARCH
Aminotransferase class I and II {ECO:0000313|EMBL:EGG41821.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
S36_SO-2_scaffold_160867_19
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(14279..15379)
DNA (1101bp) protein (367aa)
UPF0284 protein H729_02860 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T9C7_9EURY
hypothetical protein
UPF0284 protein MMINT_06140 {ECO:0000256|HAMAP-Rule:MF_01086}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
S36_SO-2_scaffold_160867_20
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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15441..16442
DNA (1002bp) protein (334aa)
Periplasmic binding protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RXV5_THEOJ
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ADL08179.1}; Flags: Precursor;; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
S36_SO-2_scaffold_160867_21
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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16445..17521
DNA (1077bp) protein (359aa)
Transport system permease protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVP9_ACEAZ
transport system permease
Transport system permease protein {ECO:0000313|EMBL:ADL12308.1}; Flags: Precursor;; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288).;"
S36_SO-2_scaffold_160867_22
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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17533..18807
DNA (1275bp) protein (425aa)
ABC transporter related protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVQ0_ACEAZ
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADL12309.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288).;"
S36_SO-2_scaffold_160867_23
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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18789..19316
DNA (528bp) protein (176aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
hypothetical protein n=1 Tax=Archaea RepID=UPI00036BC4A0
Cob(I)yrinic acid a c-diamide adenosyltransferase {ECO:0000313|EMBL:KGF12530.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
S36_SO-2_scaffold_160867_24
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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19456..20580
DNA (1125bp) protein (375aa)
Proline dipeptidase related protein n=1 Tax=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) RepID=Q9HJD2_THEAC
proline dipeptidase
Tax=BJP_IG2158_Thermoplasmatales_53_16
S36_SO-2_scaffold_160867_25

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20634..21341
DNA (708bp) protein (236aa)
ccdA; cytochrome c-type biogenesis protein CcdA (EC:1.8.-.-)
Cytochrome c-type biogenesis protein CcdA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W2_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:KKN09740.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S36_SO-2_scaffold_160867_26
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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21346..22410
DNA (1065bp) protein (355aa)
thiol-disulfide isomerase-like thioredoxin
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:AIF85320.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
thiol-disulfide isomerase id=5241311 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S36_SO-2_scaffold_160867_27
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(22758..23576)
DNA (819bp) protein (273aa)
cofE-2; F420-0:gamma-L-glutamate ligase (EC:6.3.2.-)
Putative uncharacterized protein n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RUC6_CENSY
Tax=RBG_16_Thaumarchaeota_49_8_curated
S36_SO-2_scaffold_160867_28

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comp(23573..24028)
DNA (456bp) protein (152aa)
Putative Endoribonuclease L-PSP, YjgF family protein n=1 Tax=uncultured archaeon RepID=I3RKG1_9ARCH
Putative Endoribonuclease L-PSP, YjgF family protein {ECO:0000313|EMBL:AFK24821.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
putative endoribonuclease L-PSP
S36_SO-2_scaffold_160867_29
CG_CP01_01, CG_CP01, Bacteria

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24165..24806
DNA (642bp) protein (214aa)
Tax=CG_CP01_01
S36_SO-2_scaffold_160867_30
unknown

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24781..25320
DNA (540bp) protein (180aa)

This feature has no annotations

Displaying items 1-30 of 248 in total

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