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S36_SO-2_scaffold_250659

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_250659_1
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(1..921)
DNA (921bp) protein (307aa)
Radical SAM domain-containing protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VLD8_CLOSH
radical SAM domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_250659_2
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(921..2303)
DNA (1383bp) protein (461aa)
Rod shape-determining protein MrdB n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZB6_UNCTG
rod shape-determining protein MrdB
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_250659_3
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(2356..4149)
DNA (1794bp) protein (598aa)
Penicillin-binding protein id=3762500 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
penicillin-binding protein 2
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_250659_4
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

comp(4146..4625)
DNA (480bp) protein (160aa)
Rod shape-determining protein MreD n=2 Tax=Treponema denticola RepID=M2AF19_TREDN
rod shape-determining protein MreD
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
S36_SO-2_scaffold_250659_5
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(4622..5464)
DNA (843bp) protein (281aa)
Cell shape-determining protein MreC n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVG7_DESAC
rod shape-determining protein MreC
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
S36_SO-2_scaffold_250659_6
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(5503..6531)
DNA (1029bp) protein (343aa)
Cell-shape-determining protein, MreB/Mrl family id=4607947 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
rod shape-determining protein MreB
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_250659_7
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists


comp(6561..6845)
DNA (285bp) protein (95aa)
50S ribosomal protein L17 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A978_STAND
50S ribosomal protein L17
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_250659_8
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(6912..7874)
DNA (963bp) protein (321aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha id=4607941 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_250659_9
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists


comp(7891..8475)
DNA (585bp) protein (195aa)
30S ribosomal protein S4 n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A2V7_MAHA5
30S ribosomal protein S4
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_250659_10
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists


comp(8551..8982)
DNA (432bp) protein (144aa)
30S ribosomal protein S11 id=3762493 bin=GWA2_Elusimicrobia_69_24 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
30S ribosomal protein S11
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
S36_SO-2_scaffold_250659_11
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists


comp(9004..9408)
DNA (405bp) protein (135aa)
30S ribosomal protein S13 n=2 Tax=Desulfotomaculum RepID=F6B5R8_DESCC
ribosomal protein S13
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
S36_SO-2_scaffold_250659_12
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

comp(9546..9797)
DNA (252bp) protein (84aa)
Translation initiation factor IF-1 id=4607839 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
translation initiation factor IF-1
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
S36_SO-2_scaffold_250659_13
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(9803..10546)
DNA (744bp) protein (248aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q1L6_9FIRM
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_250659_14
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(10577..11230)
DNA (654bp) protein (218aa)
Adenylate kinase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BAU5_9EURY
Adenylate kinase
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_250659_15
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists


comp(11241..12080)
DNA (840bp) protein (280aa)
Protein translocase subunit SecY id=3762488 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
protein translocase subunit SecY
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_250659_16
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(12452..12916)
DNA (465bp) protein (155aa)
Ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C4Y1_THEGP
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_250659_17
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(13300..13812)
DNA (513bp) protein (171aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EB09_METMS
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_250659_18
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(13826..15559)
DNA (1734bp) protein (578aa)
Acetolactate synthase id=4123631 bin=GWF2_OP3_43_52 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
acetolactate synthase large subunit
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_250659_19
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

comp(15577..16704)
DNA (1128bp) protein (376aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Thermincola potens (strain JR) RepID=D5XAE6_THEPJ
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
Displaying 19 items

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