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S36_SO-2_scaffold_243625

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_243625_1
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

2..430
DNA (429bp) protein (143aa)
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
S36_SO-2_scaffold_243625_2
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

631..978
DNA (348bp) protein (116aa)
P-II family nitrogen regulatory protein n=1 Tax=uncultured microorganism RepID=D5I158_9ZZZZ
nitrogen regulatory protein P-II
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
S36_SO-2_scaffold_243625_3
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

975..2351
DNA (1377bp) protein (459aa)
Major facilitator superfamily MFS_1 id=1697196 bin=GWA2__Bacteriovorax-rel_49_15 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
major facilitator transporter
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_243625_4
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

2351..3919
DNA (1569bp) protein (523aa)
nirA; ferredoxin-nitrite reductase (EC:1.7.7.1)
Ferredoxin-nitrite reductase id=4453411 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_243625_5
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

3929..4246
DNA (318bp) protein (106aa)
Nitrogen regulatory protein P-II n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4Q7T4_CALH1
nitrogen regulatory protein p-ii
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
S36_SO-2_scaffold_243625_6
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

4308..4826
DNA (519bp) protein (173aa)
Alkyl hydroperoxide reductase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU88_9AQUI
alkyl hydroperoxide reductase
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_243625_7
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

4844..7504
DNA (2661bp) protein (887aa)
DNA polymerase id=4306446 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
DNA polymerase I
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_243625_8
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

7601..8185
DNA (585bp) protein (195aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002DBD8FE
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_243625_9
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

8322..9602
DNA (1281bp) protein (427aa)
Transcription termination factor Rho id=4968611 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
transcription termination factor
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_243625_10
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

9813..10721
DNA (909bp) protein (303aa)
Peptidase M23 id=4982276 bin=GWA2_Elusimicrobia_66_18 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
peptidase M23
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_243625_11
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists


10723..11061
DNA (339bp) protein (113aa)
50S ribosomal protein L31 id=4968612 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
rpmE; 50S ribosomal protein L31
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
S36_SO-2_scaffold_243625_12
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

11129..12220
DNA (1092bp) protein (364aa)
Peptide chain release factor 1 n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CNK6_THEYO
prfA; peptide chain release factor 1
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_243625_13
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

12220..13089
DNA (870bp) protein (290aa)
prmC; release factor glutamine methyltransferase PrmC (EC:2.1.1.297)
Release factor glutamine methyltransferase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TTV3_THETC
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_243625_14
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

13046..14326
DNA (1281bp) protein (427aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=MURA_UNCTG
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Displaying 14 items

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