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S36_SO-2_scaffold_180815

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_180815_1
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3..374)
DNA (372bp) protein (124aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=5044109 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
endonuclease III (EC:4.2.99.18)
Tax=AR11
S36_SO-2_scaffold_180815_2
unknown

Not on your lists

comp(381..989)
DNA (609bp) protein (203aa)

This feature has no annotations

S36_SO-2_scaffold_180815_3

Not on your lists

comp(1029..1727)
DNA (699bp) protein (233aa)
N-glycosylase/DNA lyase {ECO:0000313|EMBL:KHO51128.1}; EC=3.2.2.- {ECO:0000313|EMBL:KHO51128.1};; EC=4.2.99.18 {ECO:0000313|EMBL:KHO51128.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Probable N-glycosylase/DNA lyase id=5800247 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S36_SO-2_scaffold_180815_4
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(1786..6549)
DNA (4764bp) protein (1588aa)
APHP domain-containing protein id=5800628 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Cell surface protein
Tax=RBG_16_Micrarchaeota_36_9_curated
S36_SO-2_scaffold_180815_5
unknown

Not on your lists

comp(6675..6947)
DNA (273bp) protein (91aa)

This feature has no annotations

S36_SO-2_scaffold_180815_6
unknown

Not on your lists

comp(6978..7406)
DNA (429bp) protein (143aa)

This feature has no annotations

S36_SO-2_scaffold_180815_7
unknown

Not on your lists

comp(7703..7966)
DNA (264bp) protein (88aa)

This feature has no annotations

S36_SO-2_scaffold_180815_8
GWA2_OP11_40_7b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(8099..8509)
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR73123.1}; TaxID=1618562 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA2_40_7.;"
id=5799756 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S36_SO-2_scaffold_180815_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(8606..10501)
DNA (1896bp) protein (632aa)
ATP dependent helicase id=5799755 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATP dependent helicase
Tax=CG_Woesearch_02
S36_SO-2_scaffold_180815_10
unknown

Not on your lists

10597..10848
DNA (252bp) protein (84aa)

This feature has no annotations

S36_SO-2_scaffold_180815_11
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

10845..11249
DNA (405bp) protein (135aa)
Ribonuclease VapC n=2 Tax=Sulfolobus islandicus RepID=C3NBH2_SULIY
PilT protein domain-containing protein
Tax=RBG_16_Micrarchaeota_49_10_curated
S36_SO-2_scaffold_180815_12
unknown

Not on your lists

11367..12359
DNA (993bp) protein (331aa)

This feature has no annotations

S36_SO-2_scaffold_180815_13

Not on your lists

12411..12779
DNA (369bp) protein (123aa)
id=5047509 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45718.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S36_SO-2_scaffold_180815_14
unknown

Not on your lists

comp(12805..12951)
DNA (147bp) protein (49aa)

This feature has no annotations

S36_SO-2_scaffold_180815_15

Not on your lists

13298..13933
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK5_METMS id=5103592 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62873.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S36_SO-2_scaffold_180815_16

Not on your lists

comp(14153..14950)
DNA (798bp) protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51311.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
S36_SO-2_scaffold_180815_17
unknown

Not on your lists

15542..15778
DNA (237bp) protein (79aa)

This feature has no annotations

S36_SO-2_scaffold_180815_18
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

15741..16142
DNA (402bp) protein (134aa)
hypothetical protein
hypothetical protein; K09005 hypothetical protein id=5240732 bin=GW2011_AR10_complete species=Rhodanobacter fulvus genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
S36_SO-2_scaffold_180815_19
GWF2_OD1_39_13, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

16194..16562
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR04827.1}; TaxID=1618995 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_39_13.;"
S36_SO-2_scaffold_180815_20
unknown

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16614..16766
DNA (153bp) protein (51aa)

This feature has no annotations

S36_SO-2_scaffold_180815_21
unknown

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17208..17555
DNA (348bp) protein (116aa)

This feature has no annotations

S36_SO-2_scaffold_180815_22

Not on your lists

18196..19011
DNA (816bp) protein (272aa)
phage integrase family protein id=5043988 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Phage integrase family protein {ECO:0000313|EMBL:KHO46978.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Phage integrase family protein
S36_SO-2_scaffold_180815_23

Not on your lists

comp(19006..19569)
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51023.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
seg id=5799965 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S36_SO-2_scaffold_180815_24

Not on your lists

comp(19739..20284)
DNA (546bp) protein (182aa)
Marine sediment metagenome DNA, contig: S01H1_S21807 {ECO:0000313|EMBL:GAG16603.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Helix-turn-helix, type 11 id=5043991 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
S36_SO-2_scaffold_180815_25

Not on your lists

comp(20459..21130)
DNA (672bp) protein (224aa)
Marine sediment metagenome DNA, contig: S01H1_L02580 {ECO:0000313|EMBL:GAF77680.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S36_SO-2_scaffold_180815_26
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

21664..22293
DNA (630bp) protein (210aa)
RNA methylase id=5799774 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_180815_27
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

22380..22658
DNA (279bp) protein (93aa)
DNA-directed RNA polymerase subunit L id=5799914 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit L
Tax=CG_Woesearch_01
S36_SO-2_scaffold_180815_28

Not on your lists

22806..23306
DNA (501bp) protein (167aa)
id=5050195 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO44976.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S36_SO-2_scaffold_180815_29
unknown

Not on your lists

23317..23550
DNA (234bp) protein (78aa)

This feature has no annotations

S36_SO-2_scaffold_180815_30
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23854..24885)
DNA (1032bp) protein (344aa)
Insertion sequence transposase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JIR9_AGRRK
insertion sequence transposase
Insertion sequence transposase protein {ECO:0000313|EMBL:ACM29811.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
Displaying items 1-30 of 32 in total

View Taxonomy