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S36_SO-2_scaffold_186368

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_186368_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3..191)
DNA (189bp) protein (63aa)
Phosphoesterase, DHHA1 id=5044037 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
S36_SO-2_scaffold_186368_2
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(247..2082)
DNA (1836bp) protein (612aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP68812.1}; TaxID=1618707 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_35_17.;"
elm:ELI_1829 hypothetical protein id=130574 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
S36_SO-2_scaffold_186368_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2140..3375
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HKD5_PYRSN id=5102913 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Woesearch_02
S36_SO-2_scaffold_186368_4
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(3368..4429)
DNA (1062bp) protein (354aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PMK9_9PAST
Tax=CG_Woesearch_03
S36_SO-2_scaffold_186368_5
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(4433..5041)
DNA (609bp) protein (203aa)
Isopropylmalate isomerase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U1G3_9EURY
3-isopropylmalate dehydratase, small subunit
Tax=CG_Woesearch_03
S36_SO-2_scaffold_186368_6
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(5058..6458)
DNA (1401bp) protein (467aa)
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI0003748856
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S36_SO-2_scaffold_186368_7
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(6451..7557)
DNA (1107bp) protein (369aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RG97_MOOTA
Tax=CG_Woesearch_03
S36_SO-2_scaffold_186368_8
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7533..7949)
DNA (417bp) protein (139aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
2-isopropylmalate synthase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PQI3_9CLOT
2-isopropylmalate synthase
S36_SO-2_scaffold_186368_9
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(8586..9002)
DNA (417bp) protein (139aa)
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 id=5048480 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
replication factor A1
Tax=CG_Woesearch_01
S36_SO-2_scaffold_186368_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9347..10708)
DNA (1362bp) protein (454aa)
Putative dihydrolipoamide dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP2_NITGG
dihydrolipoamide dehydrogenase
Putative dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:AFU59587.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S36_SO-2_scaffold_186368_11
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10813..12072)
DNA (1260bp) protein (420aa)
malate dehydrogenase oxaloacetate-decarboxylating (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate-decarboxylating) id=2698727 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR11
S36_SO-2_scaffold_186368_12

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comp(12065..13468)
DNA (1404bp) protein (468aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
pykF; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Leptonema illini DSM 21528 RepID=H2CLJ7_9LEPT
S36_SO-2_scaffold_186368_13

Not on your lists

comp(13523..13927)
DNA (405bp) protein (135aa)
hypothetical protein
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein id=5241001 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59992.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
S36_SO-2_scaffold_186368_14
AR15, Woesearchaeaota, DPANN, Archaea

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comp(13929..14147)
DNA (219bp) protein (73aa)
transmembrane_regions id=5799942 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
S36_SO-2_scaffold_186368_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(14183..15274)
DNA (1092bp) protein (364aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUZ5_9EURY
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_186368_16
GWA1_OP11_39_11, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(15309..16169)
DNA (861bp) protein (287aa)
Integral membrane protein DUF6 {ECO:0000313|EMBL:KKQ95582.1}; TaxID=1618453 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA1_39_11.;"
Putative uncharacterized protein id=2814227 bin=GWA2_Planctomycete_KSU_39_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
S36_SO-2_scaffold_186368_17
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16171..16812)
DNA (642bp) protein (214aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=5093974 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
ribulose-phosphate 3-epimerase
Tax=AR11
S36_SO-2_scaffold_186368_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16840..17313)
DNA (474bp) protein (158aa)
exosome subunit; K07581 hypothetical protein id=5048514 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
exosome subunit
Tax=CG_Woesearch_02
S36_SO-2_scaffold_186368_19

Not on your lists

comp(17310..17582)
DNA (273bp) protein (91aa)
Uncharacterized protein conserved in archaea id=5799820 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61151.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
S36_SO-2_scaffold_186368_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17585..17920)
DNA (336bp) protein (112aa)
erpK protein; K04798 prefoldin beta subunit id=5050960 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Prefoldin subunit beta
Tax=CG_Woesearch_02
S36_SO-2_scaffold_186368_21

Not on your lists

comp(17926..18063)
DNA (138bp) protein (46aa)
Marine sediment metagenome DNA, contig: S01H1_S17826 {ECO:0000313|EMBL:GAG16421.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
id=5103032 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
S36_SO-2_scaffold_186368_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18063..18374)
DNA (312bp) protein (104aa)
rpl37ae; 50S ribosomal protein L37; K02921 large subunit ribosomal protein L37Ae id=5044064 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L37Ae
Tax=AR11
S36_SO-2_scaffold_186368_23

Not on your lists

18868..21483
DNA (2616bp) protein (872aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003774E83
Peptide chain release factor subunit 1
Peptide chain release factor subunit 1 {ECO:0000313|EMBL:AJF62595.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S36_SO-2_scaffold_186368_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

21511..22176
DNA (666bp) protein (222aa)
hypothetical protein id=5045855 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
S36_SO-2_scaffold_186368_25
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

22256..22465
DNA (210bp) protein (70aa)
Histone, HmtA n=4 Tax=Methanobrevibacter RepID=A5ULH1_METS3 id=5103251 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histone, HmtA
Tax=CG_Pacearch_04
S36_SO-2_scaffold_186368_26
unknown

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22533..24437
DNA (1905bp) protein (635aa)

This feature has no annotations

S36_SO-2_scaffold_186368_27
R_OP11_Roizmanbacteria_35_13, Roizmannbacteria, Microgenomates, Bacteria

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24484..24711
DNA (228bp) protein (76aa)
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_35_13_curated
S36_SO-2_scaffold_186368_28
unknown

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24711..25064
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3531A
S36_SO-2_scaffold_186368_29
AR4, Woesearchaeaota, DPANN, Archaea

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25397..25561
DNA (165bp) protein (55aa)
seg id=5043702 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
S36_SO-2_scaffold_186368_30
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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25536..27161
DNA (1626bp) protein (542aa)
Tax=GWA2_WOR_2_47_8_curated
Displaying items 1-30 of 54 in total

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