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S36_SO-2_scaffold_265611

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_265611_1
R_PER_ii_55_13, PER-ii, Bacteria

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3..2246
DNA (2244bp) protein (748aa)
Kelch repeats protein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L0P6_ZOBGA
Kelch repeat-containing protein
Tax=RIFCSPHIGHO2_01_FULL_PER_ii_55_13_curated
S36_SO-2_scaffold_265611_2

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2362..3054
DNA (693bp) protein (231aa)
dph2; 2-(3-amino-3-carboxypropyl)histidine synthase (EC:2.5.1.108)
Diphthamide synthase subunit {ECO:0000313|EMBL:KHO51464.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein; K07561 diphthamide synthase subunit DPH2 id=5044025 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
S36_SO-2_scaffold_265611_3
unknown

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comp(3056..3322)
DNA (267bp) protein (89aa)

This feature has no annotations

S36_SO-2_scaffold_265611_4

Not on your lists

comp(3358..7362)
DNA (4005bp) protein (1335aa)
Peptidase S8/S53 id=4688818 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KHO51466.1}; Flags: Fragment;; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein
S36_SO-2_scaffold_265611_5
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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comp(7402..7602)
DNA (201bp) protein (67aa)
id=2920181 bin=GWC1_Spirochaetes_27_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
Tax=GWD1_Spirochaetes_27_9_curated
S36_SO-2_scaffold_265611_6
AR11, Woesearchaeaota, DPANN, Archaea

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comp(7614..8633)
DNA (1020bp) protein (340aa)
signal peptide peptidase SppA, 36K type; K04773 protease IV [EC:3.4.21.-] id=5046580 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Signal peptide peptidase SppA, 36K type
Tax=AR11
S36_SO-2_scaffold_265611_7
AR17, Woesearchaeaota, DPANN, Archaea

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comp(8584..8781)
DNA (198bp) protein (66aa)
Tax=AR17
S36_SO-2_scaffold_265611_8

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comp(8815..9339)
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52427.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
RDD id=5799579 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S36_SO-2_scaffold_265611_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

9439..9783
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363D148
Translation initiation factor 1A
Tax=AR11
S36_SO-2_scaffold_265611_10
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9784..10251)
DNA (468bp) protein (156aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; Flags: Precursor;; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1).;"
Lipoprotein signal peptidase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K946_HALHC
lipoprotein signal peptidase
S36_SO-2_scaffold_265611_11
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(10264..10683)
DNA (420bp) protein (140aa)
Tax=CG_Woesearch_01
S36_SO-2_scaffold_265611_12
unknown

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comp(10736..10900)
DNA (165bp) protein (55aa)

This feature has no annotations

S36_SO-2_scaffold_265611_13
AR15, Woesearchaeaota, DPANN, Archaea

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comp(10905..11612)
DNA (708bp) protein (236aa)
HhH-GPD family protein id=5800764 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
HhH-GPD family protein
Tax=AR15
S36_SO-2_scaffold_265611_14
unknown

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comp(11648..11944)
DNA (297bp) protein (99aa)

This feature has no annotations

S36_SO-2_scaffold_265611_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(12010..12390)
DNA (381bp) protein (127aa)
30S ribosomal protein S8e n=2 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=RS8E_PICTO id=5103085 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S8e
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_265611_16
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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12493..12909
DNA (417bp) protein (139aa)
hypothetical protein id=5042332 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_265611_17

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12969..13193
DNA (225bp) protein (75aa)
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein id=5048697 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Small nuclear ribonucleoprotein {ECO:0000313|EMBL:KHO45360.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Like-Sm ribonucleoprotein core
S36_SO-2_scaffold_265611_18
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13485..14435
DNA (951bp) protein (317aa)
Phospholipase, patatin family, putative id=3523189 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
RssA; alpha-beta hydrolase family esterase
Tax=GWC2_Pelobacteraceae_58_13_curated
S36_SO-2_scaffold_265611_19
unknown

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comp(14444..14800)
DNA (357bp) protein (119aa)

This feature has no annotations

S36_SO-2_scaffold_265611_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(14797..15069)
DNA (273bp) protein (91aa)
Tax=CG_Woesearch_02
S36_SO-2_scaffold_265611_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15048..15356)
DNA (309bp) protein (103aa)
Tax=CG_Woesearch_02
S36_SO-2_scaffold_265611_22
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(15373..16536)
DNA (1164bp) protein (388aa)
Tax=CG_Woesearch_02
S36_SO-2_scaffold_265611_23
unknown

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comp(16565..17116)
DNA (552bp) protein (184aa)

This feature has no annotations

S36_SO-2_scaffold_265611_24

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comp(17237..17545)
DNA (309bp) protein (103aa)
id=5048677 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45340.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S36_SO-2_scaffold_265611_25
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

17655..17822
DNA (168bp) protein (56aa)
phosphoglucomutase/phosphomannomutase (EC:5.4.2.8)
Phosphoglucosamine mutase id=4359357 bin=GWF2_Planctomycete_41_51 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=GWF2_Planctomycetes_41_51_curated
Displaying 25 items

View Taxonomy