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14_0929_02_40cm_scaffold_5

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Displaying items 1-30 of 163 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_02_40cm_scaffold_5_1
Jonquetella anthropi, Jonquetella, Synergistales, Synergistia, Synergistetes, Bacteria

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2..493
DNA (492bp) protein (164aa)
Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8N4_9BACT
Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein {ECO:0000313|EMBL:EEX47874.1}; TaxID=645512 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Jonquetella.;" source="Jonquetella anthropi E3_33 E1.;"
putative branched-chain amino acid ABC transporter, peroplasmic substrate-binding protein
14_0929_02_40cm_scaffold_5_2
Jonquetella anthropi, Jonquetella, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

537..1361
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EC4C1 rbh
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EHM13317.1}; Flags: Precursor;; TaxID=885272 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Jonquetella.;" source="Jonquetella anthropi DSM 22815.;"
branched-chain amino acid ABC transporter permease component
14_0929_02_40cm_scaffold_5_3
Jonquetella anthropi, Jonquetella, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

1378..2352
DNA (975bp) protein (325aa)
ABC-type branched-chain amino acid transport system, permease component n=2 Tax=Jonquetella RepID=H0UKV7_9BACT rbh
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:EHM13316.1}; TaxID=885272 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Jonquetella.;" source="Jonquetella anthropi DSM 22815.;"
branched-chain amino acid ABC transporter permease component rbh
14_0929_02_40cm_scaffold_5_4
Jonquetella anthropi, Jonquetella, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

2349..3125
DNA (777bp) protein (259aa)
ABC-type branched-chain amino acid transport system, ATPase component n=3 Tax=Jonquetella RepID=H0UKV6_9BACT rbh
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EHM13315.1}; TaxID=885272 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Jonquetella.;" source="Jonquetella anthropi DSM 22815.;"
ABC transporter rbh
14_0929_02_40cm_scaffold_5_5
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3127..3837
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035F0D17
braG; high-affinity branched-chain amino acid transporter ATP-binding protein BraG
High-affinity branched-chain amino acid transport ATP-binding protein BraG {ECO:0000313|EMBL:AFL53000.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
14_0929_02_40cm_scaffold_5_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3841..4614
DNA (774bp) protein (258aa)
Putative uncharacterized protein id=3229901 bin=GWF2_Methylomirabilis_70_14 species=Nocardia farcinica genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_02_40cm_scaffold_5_7
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4715..5944
DNA (1230bp) protein (410aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Burkholderia sp. BT03 RepID=J2IJH2_9BURK
Urea ABC transporter {ECO:0000313|EMBL:KDR40289.1}; Urea ABC transporter, urea binding protein {ECO:0000313|EMBL:CDY74677.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
branched-chain amino acid ABC transporter substrate-binding protein
14_0929_02_40cm_scaffold_5_8
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6001..6861
DNA (861bp) protein (287aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RT04_9PROT
ABC transporter amide-urea permease {ECO:0000313|EMBL:GAN77294.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
livH; urea or short-chain amide ABC transporter
14_0929_02_40cm_scaffold_5_9
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6861..7862
DNA (1002bp) protein (334aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RT03_9PROT
Urea ABC transporter {ECO:0000313|EMBL:KDB02791.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
inner-membrane translocator
14_0929_02_40cm_scaffold_5_10
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7859..8584
DNA (726bp) protein (242aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEF23706.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEF23706.1};; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (strain 12-X).;"
Monosaccharide-transporting ATPase n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AFS3_PSEF1
14_0929_02_40cm_scaffold_5_11
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8571..9260
DNA (690bp) protein (230aa)
Putative urea ABC transporter, ATP-binding protein UrtE n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RT01_9PROT
Putative urea ABC transporter, ATP-binding protein UrtE {ECO:0000313|EMBL:EFH09569.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
branched-chain amino acid transporter, ATP-binding protein
14_0929_02_40cm_scaffold_5_12
unknown

Not on your lists

9294..9494
DNA (201bp) protein (67aa)

This feature has no annotations

14_0929_02_40cm_scaffold_5_13
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9505..10920
DNA (1416bp) protein (472aa)
Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CDY74675.1}; EC=6.3.5.6 {ECO:0000313|EMBL:CDY74675.1};; EC=6.3.5.7 {ECO:0000313|EMBL:CDY74675.1};; Glutamyl-tRNA amidotransferase {ECO:0000313|EMBL:KDR40287.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
amidase (EC:3.5.1.4)
Amidase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G4X5_9BURK
14_0929_02_40cm_scaffold_5_14
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10917..11810)
DNA (894bp) protein (298aa)
Arginase/agmatinase/formiminoglutamase n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WKH3_PANSA
Arginase/agmatinase/formiminoglutamase
Tax=RBG_16_Actinobacteria_68_21_curated
14_0929_02_40cm_scaffold_5_15
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11876..12715)
DNA (840bp) protein (280aa)
Polyamine ABC transporter n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JN73_AGRRK
polyamine ABC transporter
Polyamine ABC transporter {ECO:0000313|EMBL:KEA03472.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
14_0929_02_40cm_scaffold_5_16
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12712..13575)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000378C37B rbh
spermidine/putrescine ABC transporter permease
ABC transporter membrane spanning protein (Spermidine/putrescine) {ECO:0000313|EMBL:ACM38892.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
14_0929_02_40cm_scaffold_5_17
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13643..14839)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D8773
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:EJJ31378.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
ABC transporter substrate binding protein (spermidine/putrescine)
14_0929_02_40cm_scaffold_5_18
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14949..16040)
DNA (1092bp) protein (364aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000255|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000255|HAMAP-Rule:MF_01726};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=POTA_RUBXD
spermidine/putrescine ABC transporter ATP-binding subunit
14_0929_02_40cm_scaffold_5_19
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(16049..18094)
DNA (2046bp) protein (682aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH24_MOOTA
Tax=RBG_16_Chloroflexi_64_32_curated
14_0929_02_40cm_scaffold_5_20
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18091..19833)
DNA (1743bp) protein (581aa)
N-methylhydantoinase (ATP-hydrolyzing)/5-oxoprolinase protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JN68_AGRRK
N-methylhydantoinase (ATP-hydrolyzing)/5-oxoprolinase protein
N-methylhydantoinase B/acetone carboxylase, alpha subunit {ECO:0000313|EMBL:EJK88292.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
14_0929_02_40cm_scaffold_5_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(19941..22085)
DNA (2145bp) protein (715aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YW4_SOLUE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ85151.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0929_02_40cm_scaffold_5_22
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

22169..23509
DNA (1341bp) protein (447aa)
DNA primase small subunit id=4718007 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
DNA primase small subunit
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
14_0929_02_40cm_scaffold_5_23
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(23437..24561)
DNA (1125bp) protein (375aa)
ligC; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] id=14629243 bin=bin8_Chloro species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
ligC; ATP-dependent DNA ligase
Tax=CSP1_4_Chloroflexi
14_0929_02_40cm_scaffold_5_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(24687..25355)
DNA (669bp) protein (223aa)
Nitroreductase id=4255947 bin=GWC2_Methylomirabilis_70_16 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nitroreductase
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_02_40cm_scaffold_5_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(25638..26582)
DNA (945bp) protein (315aa)
Import inner membrane translocase, subunit Tim44 id=4379998 bin=GWA2_Methylomirabilis_73_35 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transport protein, Tim44-like domain
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_40cm_scaffold_5_26
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

27021..27698
DNA (678bp) protein (226aa)
TetR family transcriptional regulator id=12555441 bin=CNBR_ACIDO species=Desulfobacter curvatus genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcriptional regulator
Tax=RBG_16_Acidobacteria_70_10_curated
14_0929_02_40cm_scaffold_5_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

27695..28885
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036EE0EF
Multidrug resistance efflux pump {ECO:0000313|EMBL:CDM64573.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
multidrug resistance efflux pump
14_0929_02_40cm_scaffold_5_28
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

28882..30780
DNA (1899bp) protein (633aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003691FDE
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CDM64574.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
multidrug ABC transporter ATPase
14_0929_02_40cm_scaffold_5_29
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

30792..31898
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365918C
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:CDM64575.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ABC transporter permease
14_0929_02_40cm_scaffold_5_30
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

31895..33019
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003763C20
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:CDM64576.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ABC transporter
Displaying items 1-30 of 163 in total

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