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14_0929_02_40cm_scaffold_501

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_02_40cm_scaffold_501_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

282..869
DNA (588bp) protein (196aa)
Transcriptional regulator, TetR family id=1890906 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_40cm_scaffold_501_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

859..1632
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/isomerase id=1890904 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
enoyl-CoA hydratase/isomerase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_02_40cm_scaffold_501_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1636..2385
DNA (750bp) protein (250aa)
dehydrogenase/reductase 11 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) id=3526405 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_40cm_scaffold_501_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2418..2738
DNA (321bp) protein (107aa)
Putative sterol carrier protein id=4320175 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sterol-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_40cm_scaffold_501_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2743..3777
DNA (1035bp) protein (345aa)
poly(R)-hydroxyalkanoic acid synthase subunit PhaC id=14626101 bin=bin7_NC10_sister species=Aneurinibacillus aneurinilyticus genus=Aneurinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
poly(R)-hydroxyalkanoic acid synthase subunit PhaC
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_40cm_scaffold_501_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3786..4301
DNA (516bp) protein (172aa)
Putative uncharacterized protein id=3479314 bin=GWC2_Methylomirabilis_70_16 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_02_40cm_scaffold_501_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4298..4843
DNA (546bp) protein (182aa)
Acyl dehydratase id=3479315 bin=GWC2_Methylomirabilis_70_16 species=Caulobacter sp. genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl dehydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_02_40cm_scaffold_501_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4821..5564)
DNA (744bp) protein (248aa)
3-oxoacyl-(Acyl-carrier-protein) reductase id=3479316 bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-oxoacyl-(acyl-carrier-protein) reductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_02_40cm_scaffold_501_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5684..6199
DNA (516bp) protein (172aa)
Polyhydroxyalkanoate synthesis repressor PhaR id=2278566 bin=GWA2_Elusimicrobia_69_24 species=Sphingobium sp. SYK-6 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
polyhydroxyalkanoate synthesis repressor PhaR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_40cm_scaffold_501_10
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(6259..6708)
DNA (450bp) protein (150aa)
id=14626096 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
14_0929_02_40cm_scaffold_501_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(6856..7617)
DNA (762bp) protein (254aa)
hypothetical protein PflaJ_07675 id=2008171 bin=GWB2_Proteobacteria_55_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Tax=RBG_13_Acidobacteria_68_16_curated
14_0929_02_40cm_scaffold_501_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7781..9577
DNA (1797bp) protein (599aa)
AMP-dependent synthetase and ligase id=2278568 bin=GWA2_Elusimicrobia_69_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
long-chain fatty-acid-CoA ligase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_40cm_scaffold_501_13
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

9640..10323
DNA (684bp) protein (228aa)
Short-chain dehydrogenase/reductase SDR id=3479322 bin=GWC2_Methylomirabilis_70_16 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Elusimicrobia_69_24_curated
14_0929_02_40cm_scaffold_501_14
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10339..11112)
DNA (774bp) protein (258aa)
ispU; Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2) (Di-trans,poly-cis-decaprenylcistransferase 2) (Undecaprenyl diphosphate synthase 2) (UDS 2) (EC:2.5.1.31) rbh
Isoprenyl transferase id=3479514 bin=GWC2_Methylomirabilis_70_16 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Elusimicrobia_69_24_curated
14_0929_02_40cm_scaffold_501_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11192..12196
DNA (1005bp) protein (335aa)
Alcohol dehydrogenase, zinc-containing id=2278573 bin=GWA2_Elusimicrobia_69_24 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
zinc-containing alcohol dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_40cm_scaffold_501_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12196..13008
DNA (813bp) protein (271aa)
Alpha/beta hydrolase fold protein id=3479511 bin=GWC2_Methylomirabilis_70_16 species=Nostoc sp. PCC 7107 genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alpha/beta fold family hydrolase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_40cm_scaffold_501_17
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13030..14211)
DNA (1182bp) protein (394aa)
Transporter, major facilitator family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUG5_9PROT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EHM03349.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
transporter, putative
14_0929_02_40cm_scaffold_501_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(14208..14510)
DNA (303bp) protein (101aa)
ThiamineS protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y928_THEBD id=5225419 bin=16ft_combo_ws3_JS1 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
sulfur carrier protein ThiS
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
14_0929_02_40cm_scaffold_501_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(14507..15646)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FA91_SACEN id=5225420 bin=16ft_combo_ws3_JS1 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
14_0929_02_40cm_scaffold_501_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15740..17311
DNA (1572bp) protein (524aa)
Uncharacterized protein id=2278583 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_02_40cm_scaffold_501_21
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17315..18913)
DNA (1599bp) protein (533aa)
Uncharacterized protein id=2278579 bin=GWA2_Elusimicrobia_69_24 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
14_0929_02_40cm_scaffold_501_22
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

18975..20480
DNA (1506bp) protein (502aa)
Putative uncharacterized protein id=2278585 bin=GWA2_Elusimicrobia_69_24 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
14_0929_02_40cm_scaffold_501_23
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20467..21081)
DNA (615bp) protein (205aa)
Putative uncharacterized protein id=2278591 bin=GWA2_Elusimicrobia_69_24 species=Nocardia farcinica genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
14_0929_02_40cm_scaffold_501_24
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

21095..22039
DNA (945bp) protein (315aa)
Glycosyl transferase family 2 id=2278593 bin=GWA2_Elusimicrobia_69_24 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
glycosyl transferase family protein
Tax=GWA2_Elusimicrobia_69_24_curated
14_0929_02_40cm_scaffold_501_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22055..22762
DNA (708bp) protein (236aa)
Histidine kinase id=4058803 bin=GWC2_Methylomirabilis_70_24 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_40cm_scaffold_501_26
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22759..24465)
DNA (1707bp) protein (569aa)
Glycosyl transferase, family 39 id=2278599 bin=GWA2_Elusimicrobia_69_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
4-amino-4-deoxy-L-arabinose transferase
Tax=GWA2_Elusimicrobia_69_24_curated
14_0929_02_40cm_scaffold_501_27
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

24571..27096
DNA (2526bp) protein (842aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00038247DC
repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_0929_02_40cm_scaffold_501_28
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

27434..28186
DNA (753bp) protein (251aa)
Uncharacterized protein id=4232749 bin=GWC2_Methylomirabilis_70_16 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
14_0929_02_40cm_scaffold_501_29
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

28183..31668
DNA (3486bp) protein (1162aa)
Uncharacterized protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4UAH6_OCEP5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADR37681.1}; Flags: Precursor;; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
14_0929_02_40cm_scaffold_501_30
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31815..32255
DNA (441bp) protein (147aa)
hypothetical protein id=14627935 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying items 1-30 of 31 in total

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