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Ig9238_scaffold_212650

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_212650_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

Ig9238_scaffold_212650_2
unknown

Not on your lists

639..800
DNA (162bp) protein (54aa)

This feature has no annotations

Ig9238_scaffold_212650_3
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1566..3026)
DNA (1461bp) protein (487aa)
Major facilitator superfamily MFS_1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I722_METB6
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABS55533.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
Ig9238_scaffold_212650_4
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3578..3847
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FL34_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD41469.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_212650_5
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4047..4469
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I8M6_METCZ
Uncharacterized protein {ECO:0000313|EMBL:KGP75072.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
hypothetical protein
Ig9238_scaffold_212650_6
unknown

Not on your lists

5340..5525
DNA (186bp) protein (62aa)

This feature has no annotations

Ig9238_scaffold_212650_7
unknown

Not on your lists

5690..6814
DNA (1125bp) protein (375aa)

This feature has no annotations

Ig9238_scaffold_212650_8
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6914..9046
DNA (2133bp) protein (711aa)
Type I restriction-modification system specificity subunit Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPL5_METH6
type I restriction-modification system specificity subunit
Type I restriction-modification system specificity subunit {ECO:0000313|EMBL:AET65216.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
Ig9238_scaffold_212650_9
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9073..9783
DNA (711bp) protein (237aa)
transcriptional regulator Tax=Acidithiobacillus thiooxidans RepID=UPI0002624E9F
transcriptional regulator
Tax=CG_Delta_06
Ig9238_scaffold_212650_10
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10172..11563
DNA (1392bp) protein (464aa)
Restriction modification system DNA specificity domain-containing protein Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q310I9_DESDG
restriction modification system DNA specificity domain-containing protein
Restriction modification system DNA specificity domain-containing protein {ECO:0000313|EMBL:ABB38657.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;"
Ig9238_scaffold_212650_11
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11583..13259
DNA (1677bp) protein (559aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI000380B3E0
transcriptional regulator
Tax=RBG_16_Gamma2_64_11_curated
Ig9238_scaffold_212650_12
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13737..16676
DNA (2940bp) protein (980aa)
Type I restriction-modification system, restriction subunit R {ECO:0000313|EMBL:ESR26267.1}; EC=3.1.21.3 {ECO:0000313|EMBL:ESR26267.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
Type I restriction-modification system, restriction subunit R Tax=Lutibaculum baratangense AMV1 RepID=V4R2T7_9RHIZ
Restriction endonuclease, type I, EcoRI, R subunit/Type III
Ig9238_scaffold_212650_13
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16980..21857
DNA (4878bp) protein (1626aa)
Uncharacterized protein Tax=Vibrio parahaemolyticus BB22OP RepID=L0I0B2_VIBPH
Uncharacterized protein {ECO:0000313|EMBL:AKB57703.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 227.;"
hypothetical protein
Ig9238_scaffold_212650_14
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22690..22911
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LM67_METBM
hypothetical protein
Tax=BJP_S1_SUB10_Methanoculleus_61_9
Ig9238_scaffold_212650_15
unknown

Not on your lists

22908..23174
DNA (267bp) protein (89aa)

This feature has no annotations

Ig9238_scaffold_212650_16
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23803..25077)
DNA (1275bp) protein (425aa)
Extracellular ligand-binding receptor Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBA1_METMS
extracellular ligand-binding receptor
Tax=BJP_S1_SUB10_Methanoculleus_61_9
Ig9238_scaffold_212650_17
unknown

Not on your lists

comp(25442..25756)
DNA (315bp) protein (105aa)

This feature has no annotations

Ig9238_scaffold_212650_18
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25872..26312
DNA (441bp) protein (147aa)
C-type lectin domain protein Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2K202_MARM1
C-type lectin domain protein
C-type lectin domain protein {ECO:0000313|EMBL:ADZ89996.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028; / MMB-1).;"
Ig9238_scaffold_212650_19
unknown

Not on your lists

26548..26670
DNA (123bp) protein (41aa)

This feature has no annotations

Ig9238_scaffold_212650_20
unknown

Not on your lists

comp(26716..27174)
DNA (459bp) protein (153aa)

This feature has no annotations

Ig9238_scaffold_212650_21

Not on your lists

27185..27391
DNA (207bp) protein (69aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JIX9_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38487.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Ig9238_scaffold_212650_22
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28009..28632)
DNA (624bp) protein (208aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI000378E3CC
Uncharacterized protein {ECO:0000313|EMBL:KKG95820.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
hypothetical protein
Ig9238_scaffold_212650_23
unknown

Not on your lists

comp(28636..28875)
DNA (240bp) protein (80aa)

This feature has no annotations

Ig9238_scaffold_212650_24
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28877..29632)
DNA (756bp) protein (252aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI00035E3022
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIO70884.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
Ig9238_scaffold_212650_25
unknown

Not on your lists

30001..30165
DNA (165bp) protein (55aa)

This feature has no annotations

Ig9238_scaffold_212650_26
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

30398..31153
DNA (756bp) protein (252aa)
Transposase Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH37_METAC
transposase
Transposase {ECO:0000313|EMBL:AAM06140.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
Ig9238_scaffold_212650_27
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

31166..31642
DNA (477bp) protein (159aa)
Transposase Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PRR4_METMA
transposase
Tax=BJP_S1_SUB10_Methanoculleus_61_9
Ig9238_scaffold_212650_28
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

31877..33181
DNA (1305bp) protein (435aa)
TPR repeat-containing protein Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WKQ5_METH6
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:AET63534.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
Ig9238_scaffold_212650_29
unknown

Not on your lists

comp(34164..34352)
DNA (189bp) protein (63aa)

This feature has no annotations

Ig9238_scaffold_212650_30
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(34349..34900)
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FSB6_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD42644.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Displaying items 1-30 of 57 in total

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