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Ig9238_scaffold_235279

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Displaying items 1-30 of 92 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_235279_1
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..2207)
DNA (2205bp) protein (735aa)
Putative YapH protein bin=GWF2_Bacteroidetes_35_48 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
peptidase S74
Tax=GWF2_Bacteroidetes_35_48_curated
Ig9238_scaffold_235279_2
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2791..3528
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=Cesiribacter andamanensis AMV16 RepID=M7N2J3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMR01436.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
hypothetical protein
Ig9238_scaffold_235279_3
Robiginitalea biformata, Robiginitalea, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(3581..5359)
DNA (1779bp) protein (593aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Robiginitalea.;" source="Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146).;"
Arginine--tRNA ligase Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CJX8_ROBBH
argS; arginyl-tRNA synthetase
Ig9238_scaffold_235279_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5401..6933
DNA (1533bp) protein (511aa)
Arginine deiminase {ECO:0000313|EMBL:AEV97363.1}; EC=3.5.3.6 {ECO:0000313|EMBL:AEV97363.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Arginine deiminase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE0_NIAKG
arginine deiminase
Ig9238_scaffold_235279_5
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6930..8036)
DNA (1107bp) protein (369aa)
Serine--glyoxylate aminotransferase Tax=Flavobacterium frigoris PS1 RepID=H7FVF6_9FLAO
class V aminotransferase
Tax=BJP_08E140C01_Flavobacteriales_35_8
Ig9238_scaffold_235279_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8063..8854)
DNA (792bp) protein (264aa)
Vitamin B12-binding protein Tax=Cesiribacter andamanensis AMV16 RepID=M7MWL6_9BACT
Iron ABC transporter {ECO:0000313|EMBL:KIC93252.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ABC transporter periplasmic protein
Ig9238_scaffold_235279_7
Bacteroides sp. CAG:770, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8969..9226)
DNA (258bp) protein (86aa)
Acyl carrier protein Tax=Bacteroides sp. CAG:770 RepID=R6T0P3_9BACE
Acyl carrier protein {ECO:0000313|EMBL:CDC65805.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:770.;"
acyl carrier protein
Ig9238_scaffold_235279_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9300..10592)
DNA (1293bp) protein (431aa)
ABC-2 type transporter Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ09_CHIPD
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:ACU64247.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Ig9238_scaffold_235279_9
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10691..11437)
DNA (747bp) protein (249aa)
ABC transporter related, ATPase component bin=GWB2_Bacteroidetes_32_14 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
ABC transporter-like protein
Tax=GWD2_Bacteroidetes_33_33_curated
Ig9238_scaffold_235279_10

Not on your lists

11515..11862
DNA (348bp) protein (116aa)
Marine sediment metagenome DNA, contig: S01H4_S15371 {ECO:0000313|EMBL:GAH17536.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Ribosome-binding factor A bin=GWC2_Bacteroidetes_40_22 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
Ribosome-binding factor A
Ig9238_scaffold_235279_11
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11863..13104
DNA (1242bp) protein (414aa)
ABC-type transport system, involved in lipoprotein release, permease component bin=GWF2_Bacteroidetes_33_38 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
lipoprotein release ABC transporter permease
Tax=GWF2_Bacteroidetes_33_38_curated
Ig9238_scaffold_235279_12
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13283..13651
DNA (369bp) protein (123aa)
Cupin 2 barrel domain-containing protein bin=GWE2_Bacteroidetes_42_42 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
cupin domain-containing protein
Tax=BJP_IG2102_Flavobacteriales_34_12
Ig9238_scaffold_235279_13
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13733..16303)
DNA (2571bp) protein (857aa)
Cytochrome c, mono-and diheme variants family bin=GWF2_Bacteroidetes_38_335 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
cytochrome c, mono- and diheme variants family
Tax=GWF2_Bacteroidetes_38_335_curated
Ig9238_scaffold_235279_14
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16307..16858)
DNA (552bp) protein (184aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCY1_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Ig9238_scaffold_235279_15
unknown

Not on your lists

comp(17011..17784)
DNA (774bp) protein (258aa)

This feature has no annotations

Ig9238_scaffold_235279_16

Not on your lists

17949..20777
DNA (2829bp) protein (943aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I Tax=uncultured bacterium RepID=C3U0P2_9BACT
DNA polymerase I {ECO:0000313|EMBL:ACL37082.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Ig9238_scaffold_235279_17
unknown

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20853..22007
DNA (1155bp) protein (385aa)

This feature has no annotations

Ig9238_scaffold_235279_18
unknown

Not on your lists

comp(22598..23095)
DNA (498bp) protein (166aa)

This feature has no annotations

Ig9238_scaffold_235279_19
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

23417..25327
DNA (1911bp) protein (637aa)
hypothetical protein Tax=Hymenobacter aerophilus RepID=UPI000380142B
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
Ig9238_scaffold_235279_20
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25505..26845
DNA (1341bp) protein (447aa)
Trk system potassium uptake protein TrkA Tax=Fulvivirga imtechensis AK7 RepID=L8JR09_9BACT
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:ELR71411.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
TrkA-N domain-containing protein
Ig9238_scaffold_235279_21
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26842..28299
DNA (1458bp) protein (486aa)
Potassium uptake protein TrkH Tax=Fulvivirga imtechensis AK7 RepID=L8JW62_9BACT
Potassium uptake protein TrkH {ECO:0000313|EMBL:ELR71472.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
potassium transporter
Ig9238_scaffold_235279_22
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28468..28917
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KV59_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49225.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Ig9238_scaffold_235279_23
unknown

Not on your lists

29050..29736
DNA (687bp) protein (229aa)

This feature has no annotations

Ig9238_scaffold_235279_24
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30187..30975
DNA (789bp) protein (263aa)
3-oxoacyl-[acyl-carrier protein] reductase Tax=Fulvivirga imtechensis AK7 RepID=L8JQ12_9BACT
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ELR70935.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
short-chain dehydrogenase
Ig9238_scaffold_235279_25
unknown

Not on your lists

comp(31053..31919)
DNA (867bp) protein (289aa)

This feature has no annotations

Ig9238_scaffold_235279_26
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31994..33001)
DNA (1008bp) protein (336aa)
peptidase M28 bin=GWF2_Bacteroidetes_49_14 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
leucine aminopeptidase
Tax=GWF2_Bacteroidetes_49_14_curated
Ig9238_scaffold_235279_27
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33040..34536)
DNA (1497bp) protein (499aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas macacae.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
cysteinyl-tRNA synthetase Tax=Porphyromonas macacae RepID=UPI00036A8FF1
Ig9238_scaffold_235279_28
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

34644..35612
DNA (969bp) protein (323aa)
Bacteroidetes-specific putative membrane protein bin=GWE2_Bacteroidetes_42_42 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
Bacteroidetes-specific putative membrane protein
Tax=GWF2_Bacteroidetes_43_63_curated
Ig9238_scaffold_235279_29
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35727..36494
DNA (768bp) protein (256aa)
Membrane protein Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BZI1_9BACT
Membrane protein {ECO:0000313|EMBL:ERM83248.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
membrane protein TerC
Ig9238_scaffold_235279_30
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36579..39614
DNA (3036bp) protein (1012aa)
Spore coat protein CotH Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJ21_FLUTR
Spore coat protein CotH
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Displaying items 1-30 of 92 in total

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