ggKbase home page

Ig9238_scaffold_63830

Search features with annotation key words

Displaying items 1-30 of 220 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_63830_1
unknown

Not on your lists

3..128
DNA (126bp) protein (42aa)
transposase
Ig9238_scaffold_63830_2
unknown

Not on your lists

204..476
DNA (273bp) protein (91aa)

This feature has no annotations

Ig9238_scaffold_63830_3
unknown

Not on your lists

489..725
DNA (237bp) protein (79aa)

This feature has no annotations

Ig9238_scaffold_63830_4
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(860..1381)
DNA (522bp) protein (174aa)
hypothetical protein Tax=Schlesneria paludicola RepID=UPI00029AAB42
hypothetical protein
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig9238_scaffold_63830_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

1575..1787
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLD6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67802.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Ig9238_scaffold_63830_6
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

Not on your lists

2253..2534
DNA (282bp) protein (94aa)
Prevent-host-death family protein bin=GWC2_Proteo_65_14_Ab886 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
StbD family antitoxin
Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
Ig9238_scaffold_63830_7
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2564..2827
DNA (264bp) protein (88aa)
Plasmid stabilization system protein Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PHY2_CELJU
plasmid stabilization system
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
Ig9238_scaffold_63830_8
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2961..3707
DNA (747bp) protein (249aa)
SAM-dependent methyltransferase Tax=Geobacter metallireducens RepID=Q39RW3_GEOMG
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:ABB33011.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Ig9238_scaffold_63830_9
unknown

Not on your lists

comp(3798..3911)
DNA (114bp) protein (38aa)
Integrase core domain protein Tax=Vibrio cholerae HE-16 RepID=K2WME2_VIBCL
integrase core domain protein
Ig9238_scaffold_63830_10

Not on your lists

4210..4680
DNA (471bp) protein (157aa)
Marine sediment metagenome DNA, contig: S01H4_L00697 {ECO:0000313|EMBL:GAG63738.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Ig9238_scaffold_63830_11
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

4744..5199
DNA (456bp) protein (152aa)
Rifampin ADP-ribosylating transferase Tax=Modestobacter marinus (strain BC501) RepID=I4ERD1_MODMB
arr; rifampin ADP-ribosylating transferase
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig9238_scaffold_63830_12
unknown

Not on your lists

comp(5257..5883)
DNA (627bp) protein (209aa)

This feature has no annotations

Ig9238_scaffold_63830_13
unknown

Not on your lists

6049..6546
DNA (498bp) protein (166aa)

This feature has no annotations

Ig9238_scaffold_63830_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6610..6966
DNA (357bp) protein (119aa)
Putative uncharacterized protein Tax=Variovorax paradoxus (strain S110) RepID=C5CNN9_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS17655.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
Ig9238_scaffold_63830_15
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7009..8325
DNA (1317bp) protein (439aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRI2_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM04615.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
Ig9238_scaffold_63830_16
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

8470..8718
DNA (249bp) protein (83aa)
Putative cold-shock protein Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QME7_DESAH
putative cold-shock protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig9238_scaffold_63830_17
unknown

Not on your lists

8792..9229
DNA (438bp) protein (146aa)

This feature has no annotations

Ig9238_scaffold_63830_18
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

9226..9654
DNA (429bp) protein (143aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
C_GCAxxG_C_C family protein
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig9238_scaffold_63830_19
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

9651..10208
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Caulobacter sp. AP07 RepID=J2HFW9_9CAUL
hypothetical protein
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig9238_scaffold_63830_20
unknown

Not on your lists

10269..11024
DNA (756bp) protein (252aa)

This feature has no annotations

Ig9238_scaffold_63830_21
Photobacterium halotolerans, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11047..13788
DNA (2742bp) protein (914aa)
Isochorismatase (EC:3.3.2.1)
Isochorismatase Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XYI4_ALCXX
HAD family hydrolase {ECO:0000313|EMBL:KDM91140.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium halotolerans.;"
Ig9238_scaffold_63830_22
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

13805..14176
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Arthrobacter sp. SJCon RepID=L8TRU4_9MICC
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
Ig9238_scaffold_63830_23
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14173..14694
DNA (522bp) protein (174aa)
GCN5 family acetyltransferase Tax=Arenimonas oryziterrae RepID=UPI0003B502A4
GCN5 family acetyltransferase {ECO:0000313|EMBL:EYR68877.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
putative acetyltransferase, GNAT superfamily
Ig9238_scaffold_63830_24
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

14736..15152
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W655_UNCMA
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
Ig9238_scaffold_63830_25
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(15180..15545)
DNA (366bp) protein (122aa)
YCII-related protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FDR9_VERMA
hypothetical protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig9238_scaffold_63830_26
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

15756..16181
DNA (426bp) protein (142aa)
Putative uncharacterized protein Tax=Flavobacterium frigoris PS1 RepID=H7FLI8_9FLAO
hypothetical protein
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig9238_scaffold_63830_27
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

16299..16676
DNA (378bp) protein (126aa)
PadR family transcriptional regulator Tax=Nitrolancetus hollandicus Lb RepID=I4EIY9_9CHLR
PadR family transcriptional regulator {ECO:0000313|EMBL:CCF84651.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
PadR-like family transcriptional regulator
Ig9238_scaffold_63830_28
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

16681..18048
DNA (1368bp) protein (456aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EIZ0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84652.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
Ig9238_scaffold_63830_29
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(18062..18598)
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Planococcus antarcticus DSM 14505 RepID=I4X5J1_9BACL
hypothetical protein
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig9238_scaffold_63830_30
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18624..19433)
DNA (810bp) protein (270aa)
Short-chain dehydrogenase/reductase SDR Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PL59_MEIRD
Short-chain dehydrogenase {ECO:0000313|EMBL:KGM16402.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
short-chain dehydrogenase/reductase SDR
Displaying items 1-30 of 220 in total

View Taxonomy