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Ig9238_scaffold_90910

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Displaying items 1-30 of 162 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_90910_1
unknown

Not on your lists

comp(2..139)
DNA (138bp) protein (46aa)

This feature has no annotations

Ig9238_scaffold_90910_trna_1
unknown

Not on your lists

526..599
DNA (74bp)
transferRNA Met
Ig9238_scaffold_90910_2
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

829..2757
DNA (1929bp) protein (643aa)
propionate CoA-transferase (EC:2.8.3.1)
hypothetical protein Tax=Methylobacterium sp. WSM2598 RepID=UPI000374F62C
Coenzyme A transferase {ECO:0000313|EMBL:ENO97216.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
Ig9238_scaffold_90910_3
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3195..3665
DNA (471bp) protein (157aa)
Putative uncharacterized protein Tax=Thiocapsa marina 5811 RepID=F9UBD1_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV18249.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
hypothetical protein
Ig9238_scaffold_90910_4
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3773..5152)
DNA (1380bp) protein (460aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035C741F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL72601.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Ig9238_scaffold_90910_5
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

5354..5788
DNA (435bp) protein (145aa)
Thioesterase superfamily protein Tax=Chloroflexus RepID=A9WGX6_CHLAA
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ABY34071.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
Ig9238_scaffold_90910_6
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5785..6480
DNA (696bp) protein (232aa)
Tax=RBG_16_Gamma2_60_9_curated
Ig9238_scaffold_90910_7
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6532..7053
DNA (522bp) protein (174aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI00036EE823
Glyoxalase family protein
Glyoxalase family protein {ECO:0000313|EMBL:CDN50770.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Ig9238_scaffold_90910_8
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7083..8264)
DNA (1182bp) protein (394aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI000374AE87
Alpha/beta hydrolase {ECO:0000313|EMBL:EQB30448.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
Hydrolase, alpha/beta domain protein
Ig9238_scaffold_90910_9
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8347..9543)
DNA (1197bp) protein (399aa)
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase Tax=Rhizobium sp. CF080 RepID=J2HYC3_9RHIZ
Salicylate 1-monooxygenase
Salicylate 1-monooxygenase {ECO:0000313|EMBL:CDN56924.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Ig9238_scaffold_90910_10
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

9874..10158
DNA (285bp) protein (95aa)
Putative oxidoreductase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3F8_CALAS
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAL99795.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Ig9238_scaffold_90910_11
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10448..10768
DNA (321bp) protein (107aa)
Pentapeptide MXKDX repeat protein Tax=Delftia RepID=A9BU56_DELAS
Pentapeptide MXKDX repeat protein {ECO:0000313|EMBL:AEF90579.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
pentapeptide MXKDX repeat-containing protein
Ig9238_scaffold_90910_12
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10956..12071)
DNA (1116bp) protein (372aa)
Peptide methionine sulfoxide reductase, S-isomer-specific domain and R-isomer-specific domain-containing Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A1A8_PELCD
peptide methionine sulfoxide reductase, S-isomer-specific domain and R-isomer-specific domain-containing
Peptide methionine sulfoxide reductase, S-isomer-specific domain and R-isomer-specific domain-containing {ECO:0000313|EMBL:ABA89849.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
Ig9238_scaffold_90910_13
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12191..12820)
DNA (630bp) protein (210aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI000304574D
Uncharacterized protein {ECO:0000313|EMBL:KFI25215.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
isochorismatase hydrolase
Ig9238_scaffold_90910_14
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13048..14400
DNA (1353bp) protein (451aa)
Uncharacterized protein Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4F3_POLGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ71095.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Ig9238_scaffold_90910_15
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14445..15770)
DNA (1326bp) protein (442aa)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI0003662FAA
histidine kinase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Ig9238_scaffold_90910_16
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15767..16432)
DNA (666bp) protein (222aa)
DNA-binding response regulator Tax=sulfur-oxidizing symbionts RepID=G2D9K2_9GAMM
Transcriptional regulatory protein QseB {ECO:0000313|EMBL:EGW55728.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (vent Tica).;"
two-component system response regulator QseB
Ig9238_scaffold_90910_17
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16432..16752)
DNA (321bp) protein (107aa)
Peptidase propeptide and YPEB domain protein, putative Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IR25_RHOCS
Peptidase propeptide and YPEB domain-containing protein
Peptidase propeptide and YPEB domain protein, putative {ECO:0000313|EMBL:ACI97911.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Ig9238_scaffold_90910_18
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16787..17362)
DNA (576bp) protein (192aa)
Dihem cytochrome c Tax=Thiocapsa marina 5811 RepID=F9UCN4_9GAMM
Dihem cytochrome c {ECO:0000313|EMBL:EGV18147.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
diheme cytochrome C
Ig9238_scaffold_90910_19
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17380..17769)
DNA (390bp) protein (130aa)
Acetoacetate metabolism regulatory protein AtoC Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DCX1_9GAMM
hypothetical Protein
Uncharacterized protein {ECO:0000313|EMBL:AJQ93807.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gynuella sunshinyii YC6258.;"
Ig9238_scaffold_90910_20
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17793..18374)
DNA (582bp) protein (194aa)
Cytochrome B561 Tax=sulfur-oxidizing symbionts RepID=G2DCX2_9GAMM
Cytochrome B561 {ECO:0000313|EMBL:EGV51558.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
cytochrome B561
Ig9238_scaffold_90910_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18569..21307
DNA (2739bp) protein (913aa)
Sensor diguanylate cyclase/phosphodiesterase, PAS domain-containing Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A0D5_PELCD
sensor diguanylate cyclase/phosphodiesterase, PAS domain-containing
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig9238_scaffold_90910_22
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21350..22501)
DNA (1152bp) protein (384aa)
Hydrolase, peptidase M42 family Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RTP1_ALLVD
hydrolase, peptidase M42 family
Hydrolase, peptidase M42 family {ECO:0000313|EMBL:ADC62550.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
Ig9238_scaffold_90910_23
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22526..24253)
DNA (1728bp) protein (576aa)
GNAT-family acetyltransferase TIGR03103 Tax=Thiocapsa marina 5811 RepID=F9UEU3_9GAMM
GNAT family acetyltransferase {ECO:0000313|EMBL:KJB91987.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GNAT-family acetyltransferase
Ig9238_scaffold_90910_24
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24255..26036)
DNA (1782bp) protein (594aa)
Asparagine synthetase Tax=Thiocapsa marina 5811 RepID=F9UEU4_9GAMM
Asparagine synthase {ECO:0000313|EMBL:KJB91988.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
asparagine synthase
Ig9238_scaffold_90910_25
unknown

Not on your lists

comp(26062..26244)
DNA (183bp) protein (61aa)

This feature has no annotations

Ig9238_scaffold_90910_26
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26499..27923)
DNA (1425bp) protein (475aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALE20 RepID=UPI000368F09D
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:EHQ53132.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
deoxyribodipyrimidine photo-lyase
Ig9238_scaffold_90910_27
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27934..30108)
DNA (2175bp) protein (725aa)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
tRNA(Met) cytidine acetyltransferase TmcA Tax=Nitrococcus mobilis Nb-231 RepID=A4BT93_9GAMM
hypothetical protein
Ig9238_scaffold_90910_28
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30101..30340)
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DZ84_THIND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA33696.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
Ig9238_scaffold_90910_29
CG_Mariprof_04, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30337..32184)
DNA (1848bp) protein (616aa)
Na+:Pi-cotransporter Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BQU7_9GAMM
putative Na+/Pi-cotransporter
Tax=CG_Mariprof_04
Displaying items 1-30 of 162 in total

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