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Ig9238_scaffold_7069

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_7069_1
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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193..402
DNA (210bp) protein (70aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C098_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE14424.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Ig9238_scaffold_7069_2
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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514..741
DNA (228bp) protein (76aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI000371ED4E
putative ester cyclase
Putative ester cyclase {ECO:0000313|EMBL:AFY60963.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
Ig9238_scaffold_7069_3
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(782..1930)
DNA (1149bp) protein (383aa)
Putative acetyltransferase Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WWN5_PSEDE
putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:AGI24224.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
Ig9238_scaffold_7069_4
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2034..3521
DNA (1488bp) protein (496aa)
carboxylate--amine ligase Tax=Pseudomonas luteola RepID=UPI0002E46404
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF84236.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
Ig9238_scaffold_7069_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

3744..6056
DNA (2313bp) protein (771aa)
NADH:flavin oxidoreductase/NADH oxidase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATS4_RUBXD
salicylyl-CoA 5-hydroxylase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ABG05204.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Ig9238_scaffold_7069_6
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6049..6813
DNA (765bp) protein (255aa)
3-hydroxyacyl-CoA dehydrogenase Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00037DB54C
short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:AGW91160.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
Ig9238_scaffold_7069_7
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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6810..7316
DNA (507bp) protein (169aa)
Transcriptional regulatory protein Tax=alpha proteobacterium BAL199 RepID=A8TRM2_9PROT
Transcriptional regulatory protein {ECO:0000313|EMBL:EDP64569.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
transcriptional regulator
Ig9238_scaffold_7069_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

7408..9021
DNA (1614bp) protein (538aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI000361FF76
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABG05209.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Ig9238_scaffold_7069_9
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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9194..9592
DNA (399bp) protein (133aa)
Endoribonuclease L-PSP Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LM3_RHOP5
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Ig9238_scaffold_7069_10
unknown

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9903..10439
DNA (537bp) protein (179aa)

This feature has no annotations

Ig9238_scaffold_7069_11
unknown

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10757..11296
DNA (540bp) protein (180aa)

This feature has no annotations

Ig9238_scaffold_7069_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11399..11782
DNA (384bp) protein (128aa)
Ring-cleaving dioxygenase Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CUC4_PSEST
Glyoxalase {ECO:0000313|EMBL:KJH82631.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
ring-cleaving dioxygenase
Ig9238_scaffold_7069_13
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11842..12768)
DNA (927bp) protein (309aa)
Hydrolase, NUDIX domain containing protein Tax=Acanthamoeba castellanii str. Neff RepID=L8HFQ7_ACACA
NUDIX hydrolase {ECO:0000313|EMBL:CDX15635.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
NUDIX hydrolase
Ig9238_scaffold_7069_14
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12781..13200)
DNA (420bp) protein (140aa)
hypothetical protein Tax=Thioalkalivibrio RepID=UPI00037ED526
Uncharacterized protein {ECO:0000313|EMBL:ETW93482.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
Ig9238_scaffold_7069_15
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13309..14088)
DNA (780bp) protein (260aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI000347D749
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_7069_16
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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14453..15253
DNA (801bp) protein (267aa)
Bifunctional: hydroxy-methylpyrimidine kinase (HMP kinase) hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase) Tax=Phaeospirillum molischianum DSM 120 RepID=H8FNF2_PHAMO
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CDH44359.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
phosphomethylpyrimidine kinase
Ig9238_scaffold_7069_17
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15599..17182
DNA (1584bp) protein (528aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
Phosphoenolpyruvate carboxykinase [ATP] Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A5F6_ALKEH
Ig9238_scaffold_7069_18
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17323..18033
DNA (711bp) protein (237aa)
esterase Tax=Bradyrhizobium japonicum RepID=UPI00037F9771
esterase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_7069_19
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18121..19059
DNA (939bp) protein (313aa)
Pca operon transcription factor PcaQ Tax=Thalassospira profundimaris WP0211 RepID=K2LPB3_9PROT
Pca operon transcription factor PcaQ {ECO:0000313|EMBL:EKF06752.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
Pca operon transcription factor PcaQ
Ig9238_scaffold_7069_20
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19189..20364
DNA (1176bp) protein (392aa)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:KII16526.1}; EC=1.14.13.2 {ECO:0000313|EMBL:KII16526.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter sp. S26.;"
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2)
UPI0003D6BBE2 related cluster Tax=unknown RepID=UPI0003D6BBE2
Ig9238_scaffold_7069_21
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20422..21072
DNA (651bp) protein (217aa)
FMN-binding negative transcriptional regulator Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y573_LEPCP
FMN-binding negative transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Ig9238_scaffold_7069_22

Not on your lists

21107..21862
DNA (756bp) protein (252aa)
Lipase Tax=Agarivorans albus MKT 106 RepID=R9PNU7_AGAAL
Uncharacterized protein {ECO:0000313|EMBL:KKO08163.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Ig9238_scaffold_7069_23
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21939..23945)
DNA (2007bp) protein (669aa)
TRAP transporter 4TM/12TM fusion protein bin=bin7_NC10_sister species=Wenxinia marina genus=Wenxinia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
TRAP transporter 4TM/12TM fusion protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Ig9238_scaffold_7069_24
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24060..25151)
DNA (1092bp) protein (364aa)
hypothetical protein bin=bin7_NC10_sister species=Wenxinia marina genus=Wenxinia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Ig9238_scaffold_7069_25
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25567..27165)
DNA (1599bp) protein (533aa)
Uncharacterized protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P026_AROAE
UbiD-type (de) carboxylyase-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_7069_26
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27519..28256
DNA (738bp) protein (246aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI00035D8A05
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:AJE48436.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
Ig9238_scaffold_7069_27
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28357..28821
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y902_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAW32606.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
hypothetical protein
Ig9238_scaffold_7069_28
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28847..29263
DNA (417bp) protein (139aa)
Uncharacterized protein bin=GWA2_OP3_53_43 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
lactoylglutathione lyase-like lyase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Ig9238_scaffold_7069_29
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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29373..29861
DNA (489bp) protein (163aa)
Acetyltransferase {ECO:0000313|EMBL:EZQ18867.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
acetyltransferase
histone acetyltransferase HPA2/related acetyltransferase bin=THIO_MID species=Alcanivorax sp. P2S70 genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Ig9238_scaffold_7069_30
unknown

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29884..30297
DNA (414bp) protein (138aa)

This feature has no annotations

Displaying items 1-30 of 81 in total

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