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Ig9238_scaffold_123396

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_123396_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..4012
DNA (4011bp) protein (1337aa)
chemotaxis protein CheA Tax=Marinobacter lipolyticus RepID=UPI00037F1E95
Sensor histidine kinase/response regulator ChpA, putative {ECO:0000313|EMBL:EJK99028.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens Q2-87.;"
CheA Signal transduction histidine Kinases (STHK)
Ig9238_scaffold_123396_2
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4005..4469
DNA (465bp) protein (155aa)
Putative CheW protein Tax=Pseudomonas sp. (strain M1) RepID=L1I2A8_PSEUO
Chemotaxis protein {ECO:0000313|EMBL:EXF46812.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. BAY1663.;"
putative CheW protein
Ig9238_scaffold_123396_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4480..5160)
DNA (681bp) protein (227aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ribosomal RNA small subunit methyltransferase E Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SMD8_THIDA
16S ribosomal RNA methyltransferase RsmE
Ig9238_scaffold_123396_4
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5220..6623)
DNA (1404bp) protein (468aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1J7_9GAMM
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:AKH20572.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Ig9238_scaffold_123396_5
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6592..7362)
DNA (771bp) protein (257aa)
Protein containing DUF833 (Fragment) Tax=mine drainage metagenome RepID=T1CA02_9ZZZZ
hypothetical protein
Tax=CG_Syntroph_01
Ig9238_scaffold_123396_6
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7347..8258)
DNA (912bp) protein (304aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
5,10-methylenetetrahydrofolate reductase Tax=Cupriavidus sp. HPC(L) RepID=V2HNZ3_9BURK
5,10-methylenetetrahydrofolate reductase
Ig9238_scaffold_123396_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8270..9709)
DNA (1440bp) protein (480aa)
acyH; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E8Z8_9GAMM
Tax=CG_Hydro_01
Ig9238_scaffold_123396_8
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9944..10273)
DNA (330bp) protein (110aa)
Cytochrome c, class I Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R28_RHOFD
class I cytochrome c
Cytochrome c, class I {ECO:0000313|EMBL:ABD71775.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_123396_9
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10450..10872)
DNA (423bp) protein (141aa)
Cytochrome c, class I Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R28_RHOFD
class I cytochrome c
Cytochrome c, class I {ECO:0000313|EMBL:ABD71775.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_123396_10
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11026..12216)
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
S-adenosylmethionine synthase Tax=Thiorhodovibrio sp. 970 RepID=H8Z199_9GAMM
S-adenosylmethionine synthetase
Ig9238_scaffold_123396_11
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12534..13973
DNA (1440bp) protein (480aa)
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:EGV18280.1}; EC=1.9.3.1 {ECO:0000313|EMBL:EGV18280.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
Cytochrome c oxidase, cbb3-type, subunit I Tax=Thiocapsa marina 5811 RepID=F9UBG2_9GAMM
cytochrome c oxidase, cbb3-type subunit I
Ig9238_scaffold_123396_12
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13986..14726
DNA (741bp) protein (247aa)
cytochrome c oxidase subunit CcoO (EC:1.9.3.1)
Cytochrome c oxidase subunit CcoO Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XIF1_METNJ
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Ig9238_scaffold_123396_13
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14719..14928
DNA (210bp) protein (70aa)
Putative uncharacterized protein Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FHF5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGW53829.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (vent Tica).;"
Cbb3-type cytochrome oxidase component FixQ
Ig9238_scaffold_123396_14
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14925..15779
DNA (855bp) protein (285aa)
Cytochrome c oxidase subunit CcoP (EC:1.9.3.1)
Cbb3-type cytochrome c oxidase subunit Tax=Methylophaga lonarensis MPL RepID=M7P224_9GAMM
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lonarensis MPL.;"
Ig9238_scaffold_123396_15
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16021..17472
DNA (1452bp) protein (484aa)
Cytochrome c oxidase accessory protein CcoG Tax=Thiocapsa marina 5811 RepID=F9UBG7_9GAMM
Cytochrome c oxidase accessory protein CcoG {ECO:0000313|EMBL:EGV18285.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
cytochrome c oxidase accessory protein CcoG
Ig9238_scaffold_123396_16
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17503..18063
DNA (561bp) protein (187aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI0003672D54
Putative integral membrane protein linked to a cation pump {ECO:0000313|EMBL:EIC21853.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
FixH
Ig9238_scaffold_123396_17
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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18073..20589
DNA (2517bp) protein (839aa)
Heavy metal translocating P-type ATPase Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RQC9_ALLVD
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ADC61734.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
Ig9238_scaffold_123396_18
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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20580..20762
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4IT79_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ13492.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
cbb3-type cytochrome oxidase maturation protein
Ig9238_scaffold_123396_19
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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20807..22798
DNA (1992bp) protein (664aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003682BF1
Putative Lytic transglycosylase catalytic {ECO:0000313|EMBL:CDH44426.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
lytic transglycosylase
Ig9238_scaffold_123396_20
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22867..23811
DNA (945bp) protein (315aa)
Sulfoxide reductase catalytic subunit YedY Tax=Azotobacter vinelandii RepID=C1DLN3_AZOVD
putative sulfite oxidase subunit YedY
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Ig9238_scaffold_123396_21
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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24036..24410
DNA (375bp) protein (125aa)
sulfite oxidase Tax=Arenimonas oryziterrae RepID=UPI0003B6A019
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
ferric reductase domain-containing protein transmembrane component domain
Ig9238_scaffold_123396_22
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24522..27095
DNA (2574bp) protein (858aa)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI00036FA321
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
Ig9238_scaffold_123396_23
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27102..28034
DNA (933bp) protein (311aa)
Peptidase M48 Ste24p Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNJ6_TISMK
Peptidase, M48 family {ECO:0000313|EMBL:EXJ13653.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
peptidase M48
Ig9238_scaffold_123396_24
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28031..28600
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Thauera sp. 27 RepID=N6YBN1_9RHOO
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
Ig9238_scaffold_123396_25
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28683..30341
DNA (1659bp) protein (553aa)
Acetyl-CoA synthetase Tax=Oceanibaculum indicum P24 RepID=K2J0D4_9PROT
Acetyl-CoA synthetase {ECO:0000313|EMBL:EKE76356.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
acyl-CoA synthetase/AMP-acid ligase
Ig9238_scaffold_123396_26
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

30338..30817
DNA (480bp) protein (160aa)
putative CoA-binding protein; K06929 bin=bin1_lowGC species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
Ig9238_scaffold_123396_27
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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30830..32119
DNA (1290bp) protein (430aa)
OAH/OAS sulfhydrylase Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y334_9RHOO
OAH/OAS sulfhydrylase
Tax=RBG_16_Gamma2_60_9_curated
Ig9238_scaffold_123396_28
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32157..33431
DNA (1275bp) protein (425aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:AKH19870.1}; EC=2.5.1.49 {ECO:0000313|EMBL:AKH19870.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
O-acetylhomoserine aminocarboxypropyltransferase Tax=Chitiniphilus shinanonensis RepID=UPI00037EE660
OAH/OAS sulfhydrylase
Ig9238_scaffold_123396_29
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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33466..34935
DNA (1470bp) protein (490aa)
Methyltransferase type 12 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LEK1_SYNFM
type 12 methyltransferase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
Ig9238_scaffold_123396_30
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34951..35643
DNA (693bp) protein (231aa)
Uncharacterized protein Tax=Beggiatoa alba B18LD RepID=I3CF21_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42214.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
Displaying items 1-30 of 34 in total

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