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Ig9238_scaffold_103823

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Displaying items 1-30 of 100 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_103823_1
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..396
DNA (396bp) protein (132aa)
transposase
Transposase {ECO:0000313|EMBL:AIU28403.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
transposase B bin=CNBR_ACIDO species=Burkholderia pseudomallei genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Ig9238_scaffold_103823_2
unknown

Not on your lists

comp(1265..1567)
DNA (303bp) protein (101aa)

This feature has no annotations

Ig9238_scaffold_103823_3
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3015..3710
DNA (696bp) protein (232aa)
(2Fe-2S)-binding domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
[2Fe-2S]-binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_103823_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3712..6114
DNA (2403bp) protein (801aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein (EC:1.17.1.4)
Xanthine dehydrogenase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_103823_5
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6131..7117
DNA (987bp) protein (329aa)
Carbon-monoxide dehydrogenase (Acceptor) Tax=Desulfovibrio sp. FW1012B RepID=G7QC04_9DELT
FAD-binding molybdopterin dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_103823_6
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7140..7340
DNA (201bp) protein (67aa)
Cytochrome b subunit of formate dehydrogenase-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_103823_7
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7388..8050
DNA (663bp) protein (221aa)
Cytochrome b subunit of formate dehydrogenase-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_103823_8
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8088..8507
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Desulfovibrio fructosivorans JJ RepID=E1JTQ0_DESFR
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_103823_9
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8775..10523
DNA (1749bp) protein (583aa)
hypothetical protein Tax=gamma proteobacterium SCGC AAA300-D14 RepID=UPI0003750AE1
cadherin
Peptidase C11 clostripain {ECO:0000313|EMBL:AFZ44223.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain PCC 7418) (Synechococcus sp. (strain PCC 7418)).;"
Ig9238_scaffold_103823_10
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10557..11315)
DNA (759bp) protein (253aa)
Integral membrane protein TerC Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GZG5_METFK
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:ABE50372.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
Ig9238_scaffold_103823_11
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11634..13004
DNA (1371bp) protein (457aa)
Cytochrome oxidase subunit I Tax=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) RepID=Q7WN02_BORBR
cioA; cytochrome oxidase subunit I
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
Ig9238_scaffold_103823_12
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13001..14029
DNA (1029bp) protein (343aa)
Cytochrome d ubiquinol oxidase subunit II Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BH42_9RHIZ
cytochrome d ubiquinol oxidase subunit II
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
Ig9238_scaffold_103823_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14196..15653
DNA (1458bp) protein (486aa)
NADH:flavin oxidoreductase / NADH oxidase (EC:1.-.-.-)
NADH:flavin oxidoreductase, old yellow enzyme family Tax=Luminiphilus syltensis NOR5-1B RepID=B8KT97_9GAMM
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_103823_14
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16072..17169)
DNA (1098bp) protein (366aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BX41_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE15724.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Ig9238_scaffold_103823_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17166..17522)
DNA (357bp) protein (119aa)
Putative uncharacterized protein Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI64_THIDA
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Ig9238_scaffold_103823_16
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17552..18481)
DNA (930bp) protein (310aa)
LysR family transcriptional regulator Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000366F886
LysR family transcriptional regulator
Tax=RBG_16_Gammaproteobacteria_57_12_curated
Ig9238_scaffold_103823_17
Nitrincola lacisaponensis, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18723..19757)
DNA (1035bp) protein (345aa)
Formate dehydrogenase-O, gamma subunit {ECO:0000313|EMBL:KDE39077.1}; EC=1.2.1.2 {ECO:0000313|EMBL:KDE39077.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola lacisaponensis.;"
formate dehydrogenase gamma subunit (EC:1.2.1.2)
Formate dehydrogenase gamma subunit Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A949_ALKEH
Ig9238_scaffold_103823_18
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19918..20544)
DNA (627bp) protein (209aa)
Formate dehydrogenase, iron-sulfur subunit Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YLF2_MOBAS
Formate dehydrogenase, iron-sulfur subunit {ECO:0000313|EMBL:EAS51779.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
formate dehydrogenase iron-sulfur subunit
Ig9238_scaffold_103823_19
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20558..23431)
DNA (2874bp) protein (958aa)
Formate dehydrogenase-O FdoGHI, subunit G {ECO:0000313|EMBL:KHF25744.1}; EC=1.2.1.2 {ECO:0000313|EMBL:KHF25744.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
Formate dehydrogenase, alpha subunit Tax=Neptuniibacter caesariensis RepID=Q2BNU6_NEPCE
formate dehydrogenase subunit alpha
Ig9238_scaffold_103823_20
Shewanella sp. YQH10, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23473..23682)
DNA (210bp) protein (70aa)
Formate dehydrogenase {ECO:0000313|EMBL:KFZ36676.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. YQH10.;"
hypothetical protein
Ig9238_scaffold_103823_21
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23735..24373)
DNA (639bp) protein (213aa)
Cytoplasmic chaperone TorD family protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C296_NITHN
cytoplasmic chaperone TorD family protein
Tax=RBG_16_Gamma2_60_9_curated
Ig9238_scaffold_103823_22
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24370..26040)
DNA (1671bp) protein (557aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C297_NITHN
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Tax=RBG_16_Gamma2_60_9_curated
Ig9238_scaffold_103823_23
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26314..26925)
DNA (612bp) protein (204aa)
Putative uncharacterized protein Tax=Methyloversatilis universalis FAM5 RepID=F5RIA4_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EGK70086.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
hypothetical protein
Ig9238_scaffold_103823_24
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26918..27475)
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C299_NITHN
Uncharacterized protein {ECO:0000313|EMBL:EXJ09850.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
hypothetical protein
Ig9238_scaffold_103823_25
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27509..28423
DNA (915bp) protein (305aa)
Formate dehydrogenase subunit FdhD Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DFF7_9GAMM
formate dehydrogenase
Formate dehydrogenase {ECO:0000313|EMBL:AHE97264.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
Ig9238_scaffold_103823_26
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28524..30662
DNA (2139bp) protein (713aa)
HAD-superfamily hydrolase, subfamily IIB Tax=Thiorhodovibrio sp. 970 RepID=H8YZC2_9GAMM
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:EIC22049.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
sucrose phosphate synthase
Ig9238_scaffold_103823_27
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30659..31504
DNA (846bp) protein (282aa)
HAD-superfamily hydrolase, subfamily IIB Tax=Methylomonas methanica (strain MC09) RepID=G0A3A4_METMM
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:AEF99036.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
Ig9238_scaffold_103823_28
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31516..32391
DNA (876bp) protein (292aa)
PfkB family of carbohydrate kinase Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY16_9PROT
PfkB family of carbohydrate kinase {ECO:0000313|EMBL:EAU54210.1}; species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundus ferrooxydans PV-1.;"
sugar kinase
Ig9238_scaffold_103823_29
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32388..34793
DNA (2406bp) protein (802aa)
Sucrose synthase (EC:2.4.1.13)
Sucrose synthase Tax=Thiorhodovibrio sp. 970 RepID=H8Z6L4_9GAMM
Sucrose synthase {ECO:0000313|EMBL:EIC19712.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
Ig9238_scaffold_103823_30
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34896..35780)
DNA (885bp) protein (295aa)
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase Tax=Schlesneria paludicola RepID=UPI00029A987F
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Displaying items 1-30 of 100 in total

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