ggKbase home page

Ig9238_scaffold_21614

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_21614_1
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


355..2130
DNA (1776bp) protein (592aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:BAN69551.1}; EC=6.1.1.12 {ECO:0000313|EMBL:BAN69551.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
Aspartate--tRNA ligase Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BK72_9GAMM
aspartyl-tRNA synthetase
Ig9238_scaffold_21614_2
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2206..2646
DNA (441bp) protein (147aa)
dATP pyrophosphohydrolase Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G0X5_9GAMM
dATP pyrophosphohydrolase {ECO:0000313|EMBL:EHQ51462.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
dihydroneopterin triphosphate pyrophosphatase
Ig9238_scaffold_21614_3
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2733..3833
DNA (1101bp) protein (367aa)
Quinolinate synthase A Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4STG4_META2
nadA; quinolinate synthase A
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Ig9238_scaffold_21614_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3847..4512
DNA (666bp) protein (222aa)
Uncharacterized protein Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGT2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98673.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
lysophospholipase
Ig9238_scaffold_21614_5
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4694..5443
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein MCA1220 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Y1220_METCA
hypothetical protein
Probable transcriptional regulatory protein MCA1220 {ECO:0000255|HAMAP-Rule:MF_00693}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
Ig9238_scaffold_21614_6
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5483..6001
DNA (519bp) protein (173aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC Tax=Marinobacter sp. ES-1 RepID=U7G4A4_9ALTE
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Ig9238_scaffold_21614_7
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5998..6606
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000255|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00031};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
Holliday junction ATP-dependent DNA helicase RuvA Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=RUVA_ALKEH
Holliday junction DNA helicase RuvA
Ig9238_scaffold_21614_8
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6622..7686
DNA (1065bp) protein (355aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BDK9_9GAMM
Ig9238_scaffold_21614_9
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7679..8104
DNA (426bp) protein (142aa)
4-hydroxybenzoyl-CoA thioesterase Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GUJ3_THISH
4-hydroxybenzoyl-CoA thioesterase
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:ACL73313.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Ig9238_scaffold_21614_10
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8101..8778
DNA (678bp) protein (226aa)
Cell division and transport-associated protein TolQ Tax=Nitrosococcus oceani RepID=Q3JES1_NITOC
Protein tolQ {ECO:0000313|EMBL:AKH21780.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
MotA/TolQ/ExbB proton channel
Ig9238_scaffold_21614_11
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8793..9224
DNA (432bp) protein (144aa)
Protein TolR Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FIM4_9GAMM
biopolymer transport protein ExbD/TolR
Tax=RBG_16_Gammaproteobacteria_57_12_curated
Ig9238_scaffold_21614_12
Methylophaga aminisulfidivorans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9231..10355
DNA (1125bp) protein (375aa)
Putative uncharacterized protein Tax=Methylophaga aminisulfidivorans MP RepID=F5SXU7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGL54015.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga aminisulfidivorans MP.;"
TolA protein
Ig9238_scaffold_21614_13
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10355..11665
DNA (1311bp) protein (437aa)
Protein TolB Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FIM7_9GAMM
Translocation protein TolB {ECO:0000313|EMBL:AKH22368.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
Tol-Pal system beta propeller repeat-containing protein TolB
Ig9238_scaffold_21614_14
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11689..12237
DNA (549bp) protein (183aa)
peptidoglycan-associated lipoprotein Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000368BD7C
peptidoglycan-associated (lipo)protein-like protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
Ig9238_scaffold_21614_15
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12237..13076
DNA (840bp) protein (280aa)
tol-pal system protein YbgF Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035E9A9D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL73307.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Ig9238_scaffold_21614_16
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13112..13753
DNA (642bp) protein (214aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
7-carboxy-7-deazaguanine synthase Tax=Thauera sp. (strain MZ1T) RepID=C4ZJ35_THASP
radical SAM protein
Ig9238_scaffold_21614_17
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13743..14426
DNA (684bp) protein (228aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
7-cyano-7-deazaguanine synthase Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BTY1_9GAMM
ExsB ATPase
Ig9238_scaffold_21614_18
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14559..15782
DNA (1224bp) protein (408aa)
membrane protein Tax=Leucothrix mucor RepID=UPI0003B48C44
Putative inner membrane protein {ECO:0000313|EMBL:KFZ90860.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
hypothetical protein
Ig9238_scaffold_21614_trna_1
unknown

Not on your lists

16348..16420
DNA (73bp)
transferRNA Lys
Ig9238_scaffold_21614_19
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16544..17317)
DNA (774bp) protein (258aa)
transcriptional regulator Tax=Burkholderia bryophila RepID=UPI00037FCBE3
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:AJW47098.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
Ig9238_scaffold_21614_20
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17510..17944
DNA (435bp) protein (145aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Ig9238_scaffold_21614_21
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18008..18223
DNA (216bp) protein (72aa)
Molybdenum enzyme, large subunit,related to phenylacetyl-CoA: acceptor oxidoreductase Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P037_AROAE
padB2; molybdenum enzyme, large subunit,related to phenylacetyl-CoA: acceptor oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Displaying 22 items

View Taxonomy