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Ig9238_scaffold_215627

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_215627_1
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..576
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Alcanivorax sp. PN-3 RepID=U7HXD2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERS13920.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. PN-3.;"
Ig9238_scaffold_215627_2
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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573..2384
DNA (1812bp) protein (604aa)
Tetratricopeptide TPR_2 repeat protein Tax=Pedosphaera parvula Ellin514 RepID=B9XAC5_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Ig9238_scaffold_215627_3
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2446..2844
DNA (399bp) protein (133aa)
Protein containing DUF583 Tax=Beggiatoa sp. PS RepID=A7BUE1_9GAMM
Protein containing DUF583 {ECO:0000313|EMBL:EDN69845.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
integral membrane protein CcmA
Ig9238_scaffold_215627_4
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3276..3722)
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BWP6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:BAN68622.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
hypothetical protein
Ig9238_scaffold_215627_5
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4194..4544
DNA (351bp) protein (117aa)
Putative iron-sulfur cluster insertion protein ErpA Tax=Achromobacter arsenitoxydans SY8 RepID=H0F7J9_9BURK
Putative iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
iron--sulfur cluster insertion protein ErpA
Ig9238_scaffold_215627_6
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4567..5673)
DNA (1107bp) protein (369aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
Anhydro-N-acetylmuramic acid kinase Tax=sulfur-oxidizing symbionts RepID=G2DDG7_9GAMM
hypothetical protein
Ig9238_scaffold_215627_7
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5703..7265)
DNA (1563bp) protein (521aa)
Peptidase M23 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLC9_THISH
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ACL73484.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
Ig9238_scaffold_215627_8
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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7758..8351
DNA (594bp) protein (198aa)
ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2)
ubiquinol-cytochrome C reductase Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036FF22A
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Ig9238_scaffold_215627_9
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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8351..9595
DNA (1245bp) protein (415aa)
Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC:1.10.2.2)
Cytochrome b Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XGF8_METNJ
Cytochrome b {ECO:0000256|RuleBase:RU003385}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga thiooxydans.;"
Ig9238_scaffold_215627_10
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

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9592..10317
DNA (726bp) protein (242aa)
Cytochrome c1 Tax=sulfur-oxidizing symbionts RepID=G2FDU5_9GAMM
Cytochrome c1 {ECO:0000313|EMBL:EGV51196.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
cytochrome c1
Ig9238_scaffold_215627_11
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10511..11104
DNA (594bp) protein (198aa)
stringent starvation protein A Tax=Thiothrix disciformis RepID=UPI0003723D25
sspA; stringent starvation protein A
Stringent starvation protein A {ECO:0000313|EMBL:AHF02666.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
Ig9238_scaffold_215627_12
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11144..11542
DNA (399bp) protein (133aa)
Stringent starvation protein B Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6C0R5_9GAMM
stringent starvation protein B
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO43403.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
Ig9238_scaffold_215627_13
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11614..12201)
DNA (588bp) protein (196aa)
Putative sodium-dependent transporter Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DHL2_9GAMM
putative periplasmic or secreted lipoprotein
Tax=RBG_16_Gammaproteobacteria_51_14_curated
Ig9238_scaffold_215627_14
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12315..12710)
DNA (396bp) protein (132aa)
UPF0102 protein MDMS009_1703 Tax=Methylophaga thiooxydans DMS010 RepID=C0N677_9GAMM
UPF0102 protein MDMS009_1703 {ECO:0000256|HAMAP-Rule:MF_00048}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga thiooxydans DMS010.;"
hypothetical protein
Ig9238_scaffold_215627_15
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12711..14618)
DNA (1908bp) protein (636aa)
LppC family lipoprotein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVN3_NITHN
LppC family lipoprotein
LppC family lipoprotein {ECO:0000313|EMBL:ADE13661.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Ig9238_scaffold_215627_16
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14774..15631
DNA (858bp) protein (286aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Ribosomal RNA small subunit methyltransferase I Tax=Xanthomonas gardneri ATCC 19865 RepID=F0CC88_9XANT
putative S-adenosylmethionine-dependent methyltransferase
Ig9238_scaffold_215627_17
unknown

Not on your lists

comp(15540..16226)
DNA (687bp) protein (229aa)

This feature has no annotations

Displaying 17 items

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