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Ig9238_scaffold_216857

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_216857_1
Ferrimonas balearica, Ferrimonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..142)
DNA (141bp) protein (47aa)
Elongation factor Tu Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SLQ9_FERBD
translation elongation factor 1A (EF-1A/EF-Tu)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Ferrimonadaceae; Ferrimonas.;" source="Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT).;"
Ig9238_scaffold_216857_2
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(182..2275)
DNA (2094bp) protein (698aa)
Elongation factor G Tax=Methylomicrobium album BG8 RepID=H8GQ44_METAL
fusA; elongation factor G
Tax=RBG_16_Gammaproteobacteria_57_12_curated
Ig9238_scaffold_216857_3
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2309..2782)
DNA (474bp) protein (158aa)
30S ribosomal protein S7 Tax=Thiorhodovibrio sp. 970 RepID=H8Z316_9GAMM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
30S ribosomal protein S7
Ig9238_scaffold_216857_4
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2790..3164)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 Tax=Thiorhodovibrio sp. 970 RepID=H8Z315_9GAMM
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000313|EMBL:AKH21363.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
Ig9238_scaffold_216857_5
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3325..7545)
DNA (4221bp) protein (1407aa)
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:AKH21362.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AKH21362.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FJP8_9GAMM
Ig9238_scaffold_216857_6
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7594..11694)
DNA (4101bp) protein (1367aa)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
DNA-directed RNA polymerase subunit beta Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=RPOB_THISH
DNA-directed RNA polymerase subunit beta
Ig9238_scaffold_216857_7
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11980..12363)
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CI16_ALCDB
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
Ig9238_scaffold_216857_8
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12439..13035)
DNA (597bp) protein (199aa)
50S ribosomal protein L10 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=RL10_METCA
rplJ; 50S ribosomal protein L10
Tax=RBG_16_Gammaproteobacteria_57_12_curated
Ig9238_scaffold_216857_9
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13217..13912)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4STN1_META2
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
Ig9238_scaffold_216857_10
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13917..14348)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 Tax=Methylophaga lonarensis MPL RepID=M7PSH7_9GAMM
50S ribosomal protein L11
Tax=RBG_16_Gammaproteobacteria_57_12_curated
Ig9238_scaffold_216857_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14432..14965)
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG Tax=Pseudomonas stutzeri RepID=A4VHL8_PSEU5
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
Ig9238_scaffold_216857_12
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14969..15346)
DNA (378bp) protein (126aa)
Protein translocase subunit SecE Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DYV2_THIND
secE_[H]; Preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
Ig9238_scaffold_216857_trna_1
unknown

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comp(15402..15474)
DNA (73bp)
transferRNA Trp
Ig9238_scaffold_216857_13
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15529..15669)
DNA (141bp) protein (47aa)
Elongation factor Tu Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DYY6_THIND
translation elongation factor Tu
Translation elongation factor Tu {ECO:0000313|EMBL:AHK79746.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
Displaying 14 items

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