ggKbase home page

Ig9238_scaffold_68805

Search features with annotation key words

Displaying items 1-30 of 323 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_68805_1
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

Not on your lists

2..202
DNA (201bp) protein (67aa)
RNA-directed DNA polymerase (Reverse transcriptase) Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z063_DESAT
RNA-directed DNA polymerase (Reverse transcriptase)
Tax=BJP_IG2103_ACD39_50_23
Ig9238_scaffold_68805_2
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159..953
DNA (795bp) protein (265aa)
RNA-directed DNA polymerase (Reverse transcriptase) Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z063_DESAT
RNA-directed DNA polymerase (Reverse transcriptase)
Tax=BJP_08E140C01_Syntrophobacterales_43_19
Ig9238_scaffold_68805_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1125..2003)
DNA (879bp) protein (293aa)
Region found in RelA / SpoT proteins family protein Tax=Escherichia coli RepID=G2CNZ2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KDY91484.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
RelA/SpoT protein
Ig9238_scaffold_68805_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1990..4134)
DNA (2145bp) protein (715aa)
Uncharacterized protein Tax=Escherichia RepID=G2CNZ3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KEJ67323.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
hypothetical protein
Ig9238_scaffold_68805_5
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4248..5261)
DNA (1014bp) protein (338aa)
Uncharacterized protein Tax=Clostridium sp. CAG:58 RepID=R6RYU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC48256.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
Ig9238_scaffold_68805_6
Capnocytophaga sp. oral taxon 863, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5302..6126)
DNA (825bp) protein (275aa)
hypothetical protein Tax=Eudoraea adriatica RepID=UPI00036693E2
Uncharacterized protein {ECO:0000313|EMBL:ERI64518.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 863 str. F0517.;"
hypothetical protein
Ig9238_scaffold_68805_7
unknown

Not on your lists

6311..6424
DNA (114bp) protein (38aa)

This feature has no annotations

Ig9238_scaffold_68805_8
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

6469..7593
DNA (1125bp) protein (375aa)
Putative uncharacterized protein Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCQ3_9FIRM bin=ACD39 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
hypothetical protein
Tax=BJP_IG2102_ACD39_51_10
Ig9238_scaffold_68805_9

Not on your lists

7598..7906
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2C9U6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD82761.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transcriptional regulator
Ig9238_scaffold_68805_10
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(7950..8438)
DNA (489bp) protein (163aa)
Uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=GWC2_Nitrospirae_56_14_curated
Ig9238_scaffold_68805_11
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

comp(8552..9616)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein bin=GWC2_ACD39_50_8 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein
Tax=BJP_IG2102_ACD39_51_10
Ig9238_scaffold_68805_12
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9769..11061
DNA (1293bp) protein (431aa)
Iron-sulfur cluster-binding protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9FL90_SORC5
Ferredoxin {ECO:0000313|EMBL:EYF05199.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
iron-sulfur cluster-binding protein
Ig9238_scaffold_68805_13
unknown

Not on your lists

11069..11305
DNA (237bp) protein (79aa)

This feature has no annotations

Ig9238_scaffold_68805_14
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

Not on your lists

11328..11651
DNA (324bp) protein (108aa)
Anti sigma factor antagonist bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
metal ABC transporter ATPase
Tax=BJP_IG2103_ACD39_50_23
Ig9238_scaffold_68805_15
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

comp(11693..13810)
DNA (2118bp) protein (706aa)
oligopeptidase B (EC:3.4.21.83)
Oligopeptidase B bin=GWC2_ACD39_50_8 species=Fischerella sp. JSC-11 genus=Fischerella taxon_order=Stigonematales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
Tax=GWC2_ACD39_50_8_curated
Ig9238_scaffold_68805_16
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

Not on your lists

13932..14753
DNA (822bp) protein (274aa)
id=4955061 bin=GWC2_ACD39_50_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
Tax=BJP_IG2103_ACD39_50_23
Ig9238_scaffold_68805_17
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

14750..15685
DNA (936bp) protein (312aa)
id=4955062 bin=GWC2_ACD39_50_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
Tax=BJP_IG2102_ACD39_51_10
Ig9238_scaffold_68805_18
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

Not on your lists

15695..16219
DNA (525bp) protein (175aa)
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP bin=GWC2_ACD39_50_8 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_ACD39_50_8 organism_group=ACD39
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
Tax=BJP_IG2103_ACD39_50_23
Ig9238_scaffold_68805_19
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

comp(16226..16939)
DNA (714bp) protein (238aa)
Transferase hexapeptide repeat containing protein bin=GWC2_ACD39_50_8 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWC2_ACD39_50_8 organism_group=ACD39
transferase hexapeptide repeat containing protein
Tax=BJP_IG2102_ACD39_51_10
Ig9238_scaffold_68805_20
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

comp(16972..17853)
DNA (882bp) protein (294aa)
Putative uncharacterized protein bin=GWC2_ACD39_50_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein
Tax=BJP_IG2102_ACD39_51_10
Ig9238_scaffold_68805_21
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

comp(17857..19557)
DNA (1701bp) protein (567aa)
TGS domain protein bin=GWC2_ACD39_50_8 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
phosphoribulokinase/uridine kinase
Tax=GWC2_ACD39_50_8_curated
Ig9238_scaffold_68805_22
unknown

Not on your lists

comp(19913..20425)
DNA (513bp) protein (171aa)

This feature has no annotations

Ig9238_scaffold_68805_23

Not on your lists

comp(20497..21966)
DNA (1470bp) protein (490aa)
geo:Geob_0176 transcriptional regulator, NifA subfamily, Fis family bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
Uncharacterized protein {ECO:0000313|EMBL:EKD82455.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Fis family transcriptional regulator
Ig9238_scaffold_68805_24
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

22087..22272
DNA (186bp) protein (62aa)
hypothetical protein bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
Tax=BJP_IG2102_ACD39_51_10
Ig9238_scaffold_68805_25
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

comp(22281..23093)
DNA (813bp) protein (271aa)
Exonuclease III Tax=Pseudomonas entomophila (strain L48) RepID=Q1IBR0_PSEE4
exodeoxyribonuclease III
Tax=BJP_IG2102_ACD39_51_10
Ig9238_scaffold_68805_26
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

23175..23573
DNA (399bp) protein (133aa)
Putative uncharacterized protein bin=GWC2_ACD39_50_8 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein
Tax=BJP_IG2102_ACD39_51_10
Ig9238_scaffold_68805_27
Thinopyrum elongatum, Thinopyrum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

23587..24627
DNA (1041bp) protein (347aa)
HMW glutenin subunit Tax=Aegilops umbellulata RepID=Q8S3V8_AEGUM
High-molecular-weight glutenin x-type subunit {ECO:0000313|EMBL:AAP15340.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Thinopyrum.;" source="Thinopyrum elongatum (Tall wheatgrass) (Agropyrum elongatum).;"
hypothetical protein
Ig9238_scaffold_68805_28
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

comp(24624..25376)
DNA (753bp) protein (251aa)
id=4203371 bin=GWC2_ACD39_50_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
Tax=GWC2_ACD39_50_8_curated
Ig9238_scaffold_68805_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25369..27315)
DNA (1947bp) protein (649aa)
Peptidase S9 prolyl oligopeptidase active site domain protein Tax=Cyanothece sp. (strain PCC 8801) RepID=B7JXP6_CYAP8
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Tax=RBG_16_Gamma2_65_34_curated
Ig9238_scaffold_68805_30
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

Not on your lists

comp(27312..28196)
DNA (885bp) protein (295aa)
33 kDa chaperonin bin=GWC2_ACD39_50_8 species=Leptolyngbya sp. PCC 7375 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
hslO; heat shock protein 33
Tax=BJP_IG2103_ACD39_50_23
Displaying items 1-30 of 323 in total

View Taxonomy