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Ig9238_scaffold_224264

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_224264_1
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3..1061
DNA (1059bp) protein (353aa)
Putative calcium dependent protease Tax=Indibacter alkaliphilus LW1 RepID=S2E6L7_9BACT
Putative calcium dependent protease {ECO:0000313|EMBL:EPA00267.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
peptidase C1A, papain
Ig9238_scaffold_224264_2
unknown

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1327..2361
DNA (1035bp) protein (345aa)

This feature has no annotations

Ig9238_scaffold_224264_3
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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comp(2633..3277)
DNA (645bp) protein (215aa)
Redox-sensing transcriptional repressor Rex Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHW9_9BACT
redox-sensing transcriptional repressor Rex
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_4
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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comp(3483..4721)
DNA (1239bp) protein (413aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] bin=PER_GWA2_38_35 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
alr; alanine racemase
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_5
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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comp(4718..5200)
DNA (483bp) protein (161aa)
hypothetical protein bin=GWA2_Deltaproteo_65_63 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_6
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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comp(5236..5442)
DNA (207bp) protein (69aa)
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_7
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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5623..6315
DNA (693bp) protein (231aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHJ4_9BACT
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_8
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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6482..7171
DNA (690bp) protein (230aa)
Cell-division initiation protein DivIVA Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08N06_STIAD
divIVA; cell-division initiation protein DivIVA
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_9
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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7143..7964
DNA (822bp) protein (274aa)
Purine nucleoside phosphorylase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
punA; Purine nucleoside phosphorylase
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_10
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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8135..9025
DNA (891bp) protein (297aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Quinolinate phosphoribosyltransferase, decarboxylating bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_11
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

9041..10030
DNA (990bp) protein (330aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
birA; biotin operon repressor and biotin--acetyl-CoA carboxylase ligase
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_12
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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10135..10515
DNA (381bp) protein (127aa)
FeS cluster assembly scaffold protein NifU Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVL1_ACEAZ
FeS cluster assembly scaffold protein NifU
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_13
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

10512..11168
DNA (657bp) protein (219aa)
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_14
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

11191..11394
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IN95_9PLAN
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_15
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

11433..12257
DNA (825bp) protein (275aa)
mutM; formamidopyrimidine-DNA glycosylase (EC:4.2.99.18)
formamidopyrimidine-DNA glycosylase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_16
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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comp(12429..13547)
DNA (1119bp) protein (373aa)
Membrane protein, putative bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_17
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

13764..15149
DNA (1386bp) protein (462aa)
hypothetical protein Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003B528E0
peptidase C1A papain
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_18
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

15849..16232
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MNK6_9BACT
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_19
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

16375..16770
DNA (396bp) protein (132aa)
Lipoprotein signal peptidase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHJ7_9BACT
lspA; Signal peptidase II
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_20
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

16864..17940
DNA (1077bp) protein (359aa)
chromosome partitioning; K03593 ATP-binding protein involved in chromosome partitioning bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermobifida fusca genus=Thermobifida taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ParA/MinD-like ATPase
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_21
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

18655..20019
DNA (1365bp) protein (455aa)
Chromosomal replication initiator protein DnaA Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EKH9_THECK
chromosomal replication initiator protein DnaA
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_22
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

20289..21401
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHV5_9BACT
DNA polymerase III subunit beta
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_23
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

21451..22542
DNA (1092bp) protein (364aa)
Recombinase F Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6IU60_9BACL
DNA replication and repair protein RecF
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_24
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

22561..23628
DNA (1068bp) protein (356aa)
sn-glycerol-3-phosphate ABC transporter ATP-binding protein (EC:3.6.3.20)
sugar ABC transporter ATP-binding protein Tax=Rhizobium giardinii RepID=UPI0003694F0F
Tax=BJP_IG2158_Zixibacteria_48_33
Ig9238_scaffold_224264_25
unknown

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23839..23910
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 25 items

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