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Ig9238_scaffold_8705

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_8705_1
Comamonas sp. 7D-2, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156..392
DNA (237bp) protein (79aa)
Tra Tax=Comamonas sp. 7D-2 RepID=M9UUI3_9BURK
Tra {ECO:0000313|EMBL:AGJ70662.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas sp. 7D-2.;"
putative transposase
Ig9238_scaffold_8705_2
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

559..1569
DNA (1011bp) protein (337aa)
NAD dependent epimerase/dehydratase Tax=Methyloversatilis universalis RepID=UPI0003605F56
uge; UDP-galacturonate 4-epimerase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Ig9238_scaffold_8705_3
unknown

Not on your lists

1566..1781
DNA (216bp) protein (72aa)

This feature has no annotations

Ig9238_scaffold_8705_4
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2004..2516
DNA (513bp) protein (171aa)
30S ribosomal protein S6 Tax=Uliginosibacterium gangwonense RepID=UPI000381D355
rpsF; 30S ribosomal subunit protein S6
Tax=CG_Rhodocyc_01
Ig9238_scaffold_8705_5
Methylotenera mobilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2528..2842
DNA (315bp) protein (105aa)
prepilin peptidase Tax=Methylotenera mobilis RepID=UPI00037D97FD
single-strand-binding protein/primosomal replication protein N
Primosomal replication protein n {ECO:0000256|SAAS:SAAS00194886}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540).;"
Ig9238_scaffold_8705_6
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2847..3134
DNA (288bp) protein (96aa)
30S ribosomal protein S18 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI09_AZOSU
30S ribosomal protein S18
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_8705_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3145..3594
DNA (450bp) protein (150aa)
50S ribosomal protein L9 Tax=Leeia oryzae RepID=UPI00035C196B
50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000255|HAMAP-Rule:MF_00503}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Ig9238_scaffold_8705_8
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3780..7019
DNA (3240bp) protein (1080aa)
dnaB; replicative DNA helicase (EC:3.6.4.12)
DnaB domain-containing protein Tax=Burkholderia sp. TJI49 RepID=F0GBM8_9BURK
Helicase DnaB {ECO:0000313|EMBL:KGE05590.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
Ig9238_scaffold_8705_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7052..8116
DNA (1065bp) protein (355aa)
Alanine racemase (EC:5.1.1.1)
alanine racemase Tax=Ralstonia solanacearum RepID=UPI0002F0EB21
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_8705_10
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8116..9477
DNA (1362bp) protein (454aa)
DNA repair protein radA Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRI2_SIDLE
DNA repair protein RadA
Tax=GWA2_Gallionellales_60_18_curated
Ig9238_scaffold_8705_11
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9548..10906)
DNA (1359bp) protein (453aa)
Serine/threonine protein kinase bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
serine/threonine protein kinase
Tax=GWA2_Gallionellales_60_142_curated
Ig9238_scaffold_8705_12
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10903..11700)
DNA (798bp) protein (266aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI000307726C
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
Ig9238_scaffold_8705_13
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11700..11912)
DNA (213bp) protein (71aa)
Protein kinase Tax=Sulfuricella denitrificans skB26 RepID=S6ALM4_9PROT
protein kinase
Tax=RBG_16_Deltaproteobacteria_44_11_curated
Ig9238_scaffold_8705_14
unknown

Not on your lists

12027..12167
DNA (141bp) protein (47aa)

This feature has no annotations

Ig9238_scaffold_8705_15
unknown

Not on your lists

12396..12644
DNA (249bp) protein (83aa)

This feature has no annotations

Ig9238_scaffold_8705_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12793..13593)
DNA (801bp) protein (267aa)
Short-chain dehydrogenase/reductase SDR Tax=Nitrosospira sp. APG3 RepID=M5DLR9_9PROT
Short-chain dehydrogenase {ECO:0000313|EMBL:KIO49253.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
oxidoreductase
Ig9238_scaffold_8705_17
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13590..14921)
DNA (1332bp) protein (444aa)
Putative oxidoreductase Tax=Azoarcus sp. (strain BH72) RepID=A1K6P7_AZOSB
putative oxidoreductase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig9238_scaffold_8705_18
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14888..15721)
DNA (834bp) protein (278aa)
Squalene/phytoene synthase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6I7_NITMU
squalene/phytoene synthase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_8705_19
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15718..16653)
DNA (936bp) protein (312aa)
Squalene synthase HpnC Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJT5_AZOSU
squalene synthase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig9238_scaffold_8705_trna_1
unknown

Not on your lists

16662..16743
DNA (82bp)
transferRNA Leu
Ig9238_scaffold_8705_20
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16996..18306
DNA (1311bp) protein (437aa)
Trigger factor Tax=Nitrosospira sp. APG3 RepID=M5DL10_9PROT
trigger factor
Tax=RBG_16_Betaproteobacteria_58_11_curated
Ig9238_scaffold_8705_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18319..18945
DNA (627bp) protein (209aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000255|HAMAP-Rule:MF_00444}; EC=3.4.21.92 {ECO:0000255|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000255|HAMAP-Rule:MF_00444}; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ig9238_scaffold_8705_22
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18965..20233
DNA (1269bp) protein (423aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Sulfuricella denitrificans skB26 RepID=S6AAB8_9PROT
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Ig9238_scaffold_8705_23
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20302..22710
DNA (2409bp) protein (803aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
ATP-dependent protease La (EC:3.4.21.53)
Lon protease Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSU5_SIDLE
Ig9238_scaffold_8705_24
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22743..23015
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta Tax=Nitrosospira sp. APG3 RepID=M5DL13_9PROT
nucleoid DNA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Ig9238_scaffold_8705_trna_2
unknown

Not on your lists

23026..23098
DNA (73bp)
transferRNA Val
Ig9238_scaffold_8705_trna_3
unknown

Not on your lists

23164..23237
DNA (74bp)
transferRNA Asp
Ig9238_scaffold_8705_25
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23940..24317
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUF6_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV35008.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Ig9238_scaffold_8705_26
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24301..24636
DNA (336bp) protein (112aa)
Transcriptional regulator Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUF7_ACCPU
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ACV35009.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Ig9238_scaffold_8705_27
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24660..25904)
DNA (1245bp) protein (415aa)
integrase Tax=Janthinobacterium lividum RepID=UPI000289B0AA
Prophage CP4-57 integrase {ECO:0000313|EMBL:EWS55728.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Phage integrase
Displaying items 1-30 of 100 in total

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