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Ig9238_scaffold_4385

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Displaying items 1-30 of 103 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_4385_1
unknown

Not on your lists

comp(1..666)
DNA (666bp) protein (222aa)

This feature has no annotations

Ig9238_scaffold_4385_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(763..1482)
DNA (720bp) protein (240aa)
extradiol ring-cleavage dioxygenase (EC:1.13.-.-)
Putative Extradiol ring-cleavage dioxygenase Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YZE9_BRASO
Tax=CG_Rhodocyc_01
Ig9238_scaffold_4385_3
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1479..2771)
DNA (1293bp) protein (431aa)
Major facilitator superfamily MFS_1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5C6_NITMU
permease of the major facilitator superfamily
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_4385_4
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2768..4171)
DNA (1404bp) protein (468aa)
Peptidase S41 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R0C3_ISOPI
peptidase S41
Tax=RBG_13_Bacteroidetes_43_22_curated
Ig9238_scaffold_4385_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4232..4945)
DNA (714bp) protein (238aa)
Sporulation domain protein bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
sporulation domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_4385_6
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4953..5708)
DNA (756bp) protein (252aa)
Type III pantothenate kinase Tax=Sulfuricella denitrificans skB26 RepID=S6AN99_9PROT
pantothenate kinase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig9238_scaffold_4385_7
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5705..6679)
DNA (975bp) protein (325aa)
Biotin/acetyl-CoA-carboxylase ligase Tax=Sulfuricella denitrificans skB26 RepID=S6AAW8_9PROT
biotin/acetyl-CoA-carboxylase ligase
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Ig9238_scaffold_4385_8
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6680..7594)
DNA (915bp) protein (305aa)
Putative uncharacterized protein Tax=gamma proteobacterium HTCC5015 RepID=B5JY02_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EDY85501.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
hypothetical protein
Ig9238_scaffold_4385_9
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7750..9000
DNA (1251bp) protein (417aa)
Kef-type K+ transport system, membrane component Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKI4_AZOSU
Kef-type K+ transport system membrane protein
Kef-type K+ transport system, membrane component {ECO:0000313|EMBL:AEV27723.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Ig9238_scaffold_4385_10
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9012..10184
DNA (1173bp) protein (391aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Carboxylate-amine ligase Dsui_3392 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKI3_AZOSU
carboxylate-amine ligase, YbdK family
Ig9238_scaffold_4385_11
unknown

Not on your lists

comp(10206..10487)
DNA (282bp) protein (94aa)

This feature has no annotations

Ig9238_scaffold_4385_12
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10484..11914)
DNA (1431bp) protein (477aa)
Putative glycolate oxidase subunit GlcD Tax=Thauera sp. 28 RepID=N6ZK72_9RHOO
Putative glycolate oxidase subunit GlcD {ECO:0000313|EMBL:ENO82997.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
glcD2; putative glycolate oxidase subunit GlcD
Ig9238_scaffold_4385_13
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11931..12419)
DNA (489bp) protein (163aa)
Cytidylyltransferase Tax=Azoarcus sp. KH32C RepID=H0Q486_9RHOO
cytidylyltransferase
Tax=BJP_IG2103_Dechloromonas_63_51
Ig9238_scaffold_4385_14
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12484..13440)
DNA (957bp) protein (319aa)
TPR repeat-containing protein Tax=Azospirillum sp. (strain B510) RepID=D3P0J8_AZOS1
TPR repeat-containing protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
Ig9238_scaffold_4385_15
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13783..14367)
DNA (585bp) protein (195aa)
Transport-associated protein Tax=Thauera phenylacetica B4P RepID=N6YU16_9RHOO
Transport-associated protein {ECO:0000313|EMBL:ENO95025.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
transport-associated
Ig9238_scaffold_4385_16
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14367..14993)
DNA (627bp) protein (209aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /; NBRC 12614 / NCIMB 9131 / NCTC 9757).;"
Phosphoheptose isomerase Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7P0B2_CHRVO
gmhA; phosphoheptose isomerase
Ig9238_scaffold_4385_17
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15117..15488)
DNA (372bp) protein (124aa)
hypothetical protein; K07460 putative endonuclease bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_4385_18
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15485..16669)
DNA (1185bp) protein (395aa)
LppC family lipoprotein Tax=Sulfuricella denitrificans skB26 RepID=S6B789_9PROT
LppC family lipoprotein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_4385_19
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16734..17579
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQG6_SIDLE
uroporphyrin-III C/tetrapyrrole methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_4385_20
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17641..18678
DNA (1038bp) protein (346aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
pyrC; dihydro-orotase (EC:3.5.2.3)
Dihydroorotase Tax=Ralstonia sp. AU12-08 RepID=S9T0H3_9RALS
Ig9238_scaffold_4385_21
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18811..19167
DNA (357bp) protein (119aa)
Putative transmembrane protein Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9YYN1_9NEIS
Putative transmembrane protein {ECO:0000313|EMBL:EEG10234.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
hypothetical protein
Ig9238_scaffold_4385_22
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19212..19445
DNA (234bp) protein (78aa)
Probable putative transmembrane protein Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NPT0_CHRVO
Membrane protein {ECO:0000313|EMBL:KJH69118.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum.;"
transmembrane protein
Ig9238_scaffold_4385_23
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20070..20483
DNA (414bp) protein (138aa)
hypothetical protein
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RBG_16_Betaproteobacteria_58_11_curated
Ig9238_scaffold_4385_24
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20512..21552
DNA (1041bp) protein (347aa)
Uncharacterized protein Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGK9_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Ig9238_scaffold_4385_25
Candidatus Methylopumilus turicensis, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22185..22373
DNA (189bp) protein (63aa)
Protein MraZ Tax=Methylovorus RepID=C6X979_METSD
mraZ; conserved hypothetical protein
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium MMS-10A-171.;"
Ig9238_scaffold_4385_26
unknown

Not on your lists

22471..22671
DNA (201bp) protein (67aa)

This feature has no annotations

Ig9238_scaffold_4385_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22692..23381
DNA (690bp) protein (230aa)
Ribosomal RNA small subunit methyltransferase H Tax=Thauera aminoaromatica S2 RepID=N6Z2W2_9RHOO
mraW; S-adenosyl-methyltransferase MraW
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Ig9238_scaffold_4385_28
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23392..23679
DNA (288bp) protein (96aa)
Cell division protein FtsL Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y631_NITMU
cell division protein, FtsL-like
Cell division protein FtsL {ECO:0000256|HAMAP-Rule:MF_00910}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Ig9238_scaffold_4385_29
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23676..25433
DNA (1758bp) protein (586aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:BAN36298.1}; EC=2.4.1.129 {ECO:0000313|EMBL:BAN36298.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Peptidoglycan glycosyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6AD98_9PROT
Ig9238_scaffold_4385_30
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25430..26911
DNA (1482bp) protein (494aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Methylovorus sp. (strain MP688) RepID=E4QIS3_METS6
murE; UDP-N-acetylmuramyl-tripeptide synthetase
Displaying items 1-30 of 103 in total

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