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Ig9238_scaffold_4932

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_4932_1
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..771)
DNA (771bp) protein (257aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Ribosomal RNA small subunit methyltransferase A Tax=Azoarcus sp. KH32C RepID=H0PXS4_9RHOO
ksgA; dimethyladenosine transferase
Ig9238_scaffold_4932_2
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(771..1757)
DNA (987bp) protein (329aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00536}; EC=1.1.1.262 {ECO:0000255|HAMAP-Rule:MF_00536};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00536}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
4-hydroxythreonine-4-phosphate dehydrogenase Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00035E80D4
Ig9238_scaffold_4932_3
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1786..3135)
DNA (1350bp) protein (450aa)
Chaperone SurA Tax=Sulfuricella denitrificans skB26 RepID=S6B7E4_9PROT
PpiC-type peptidyl-prolyl cis-trans isomerase
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Ig9238_scaffold_4932_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3132..5330)
DNA (2199bp) protein (733aa)
LPS-assembly protein LptD Tax=Sulfuricella denitrificans skB26 RepID=S6AJ85_9PROT
organic solvent tolerance protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_4932_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5351..6394
DNA (1044bp) protein (348aa)
Aminoglycoside phosphotransferase Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GZC2_METFK
aminoglycoside phosphotransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Ig9238_scaffold_4932_6
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6414..7103
DNA (690bp) protein (230aa)
Putative nucleotidyl transferase {ECO:0000313|EMBL:CDW93305.1}; EC=2.7.7.13 {ECO:0000313|EMBL:CDW93305.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein Tax=Thiomonas sp. FB-6 RepID=UPI0003693BF7
rfbA; glucose-1-phosphate thymidylyltransferase protein
Ig9238_scaffold_4932_7
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7100..7450
DNA (351bp) protein (117aa)
transcriptional regulator Tax=Herbaspirillum seropedicae RepID=UPI0002E41EC3
Transcriptional regulator {ECO:0000313|EMBL:KHL07886.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
transcription regulator protein
Ig9238_scaffold_4932_8
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7511..8827
DNA (1317bp) protein (439aa)
Peptidase m24 Tax=Sulfuricella denitrificans skB26 RepID=S6ADC6_9PROT
Proline aminopeptidase P II {ECO:0000313|EMBL:GAO36682.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
pepP; peptidase m24
Ig9238_scaffold_4932_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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8847..9992
DNA (1146bp) protein (382aa)
2-octaprenyl-6-methoxyphenol hydroxylase / 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC:1.14.13.-)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI000371430D
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Ig9238_scaffold_4932_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10006..11172
DNA (1167bp) protein (389aa)
hypothetical protein Tax=Chitiniphilus shinanonensis RepID=UPI000368E599
ubiquinone biosynthesis hydroxylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_4932_11
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11251..11973
DNA (723bp) protein (241aa)
Disulfide bond isomerase, DsbC/G-like protein Tax=Alicycliphilus denitrificans RepID=E8TR15_ALIDB
Disulfide isomerase {ECO:0000313|EMBL:GAO36684.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
disulfide bond isomerase, dsbc/g-like protein
Ig9238_scaffold_4932_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12014..13276)
DNA (1263bp) protein (421aa)
murein transglycosylase Tax=Thiobacillus denitrificans RepID=UPI0003614537
Murein transglycosylase {ECO:0000313|EMBL:GAO36701.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
MltA
Ig9238_scaffold_4932_13
unknown

Not on your lists

13382..13519
DNA (138bp) protein (46aa)

This feature has no annotations

Ig9238_scaffold_4932_14
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13516..13899)
DNA (384bp) protein (128aa)
Protein ApaG Tax=Sulfuricella denitrificans skB26 RepID=S6ADB7_9PROT
Mg2+/Co2+ transport protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Ig9238_scaffold_4932_15

Not on your lists

13986..14645
DNA (660bp) protein (220aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-5-phosphate 3-epimerase Tax=mine drainage metagenome RepID=T1D689_9ZZZZ
Ribulose-5-phosphate 3-epimerase {ECO:0000313|EMBL:EQD77795.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Ig9238_scaffold_4932_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14642..15331
DNA (690bp) protein (230aa)
Putative phosphoglycolate phosphatase Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUA3_PUSST
phosphoglycolate phosphatase
Tax=CG_Rhodocyc_01
Ig9238_scaffold_4932_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15458..16936
DNA (1479bp) protein (493aa)
trpE; Anthranilate synthase component 1 (EC:4.1.3.27)
Anthranilate synthase component I Tax=Thauera RepID=N6XJQ9_9RHOO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_4932_18

Not on your lists

16947..17513
DNA (567bp) protein (189aa)
Anthranilate synthase component II Tax=uncultured microorganism RepID=F8UI67_9ZZZZ
Anthranilate synthase component II {ECO:0000313|EMBL:AEI30724.1}; species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
glutamine amidotransferase of anthranilate synthase
Ig9238_scaffold_4932_19
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17516..18553
DNA (1038bp) protein (346aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
anthranilate phosphoribosyltransferase Tax=beta proteobacterium L13 RepID=UPI00037B8647
trpD; anthranilate phosphoribosyltransferase
Ig9238_scaffold_4932_20
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18550..19344
DNA (795bp) protein (265aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
hypothetical protein Tax=Thiomonas sp. FB-6 RepID=UPI00036233B3
Ig9238_scaffold_4932_21
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19551..20576
DNA (1026bp) protein (342aa)
Porin Gram-negative type Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SJX3_GALCS
porin Gram-negative type
Tax=GWA2_Gallionellales_54_124_curated
Ig9238_scaffold_4932_22
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20671..21297
DNA (627bp) protein (209aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000255|HAMAP-Rule:MF_01658}; EC=1.14.13.- {ECO:0000255|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hydroxylase {ECO:0000255|HAMAP-Rule:MF_01658}; Short=DMQ hydroxylase {ECO:0000255|HAMAP-Rule:MF_01658};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Tax=Burkholderiaceae RepID=COQ7_CUPNH
h16_A3283; ubiquinone biosynthesis protein COQ7
Ig9238_scaffold_4932_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21322..21738)
DNA (417bp) protein (139aa)
OsmC/Ohr family protein Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLK3_THIDA
OsmC/Ohr family protein
OsmC/Ohr family protein {ECO:0000313|EMBL:AAZ96404.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ig9238_scaffold_4932_24
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21735..22793)
DNA (1059bp) protein (353aa)
hypothetical protein Tax=Janthinobacterium lividum RepID=UPI000288362B
conserved hypothetical protein
Tax=CG_Beta_01
Ig9238_scaffold_4932_25
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22991..23419
DNA (429bp) protein (143aa)
50S ribosomal protein L13 Tax=Laribacter hongkongensis (strain HLHK9) RepID=RL13_LARHH
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
Ig9238_scaffold_4932_26
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23429..23821
DNA (393bp) protein (131aa)
30S ribosomal protein S9 Tax=Burkholderia kururiensis RepID=UPI00034A8195
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000255|HAMAP-Rule:MF_00532}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain K96243).;"
Ig9238_scaffold_4932_27
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23938..24966
DNA (1029bp) protein (343aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUQ8_ACCPU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Ig9238_scaffold_4932_28
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25017..25709
DNA (693bp) protein (231aa)
Uncharacterized protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMF4_AZOSU
hypothetical protein
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
Ig9238_scaffold_4932_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25719..26126
DNA (408bp) protein (136aa)
Integral membrane protein CcmA involved in cell shape determination Tax=Sulfuricella denitrificans skB26 RepID=S6AAW9_9PROT
integral membrane protein CcmA involved in cell shape determination
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_4932_30
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26155..26508
DNA (354bp) protein (118aa)
Putative iron-sulfur cluster insertion protein ErpA Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMK5_SIDLE
iron-binding protein ErpA
Putative iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Displaying items 1-30 of 33 in total

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