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Ig9238_scaffold_5676

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_5676_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1031)
DNA (1029bp) protein (343aa)
TonB-dependent receptor Tax=Stenotrophomonas maltophilia D457 RepID=I0KPN8_STEMA
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:CCH13028.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
Ig9238_scaffold_5676_2
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1055..1801
DNA (747bp) protein (249aa)
ribosome maturation protein RimP Tax=Thiobacillus denitrificans RepID=UPI00037E98BF
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
hypothetical protein
Ig9238_scaffold_5676_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1819..3306
DNA (1488bp) protein (496aa)
Transcription termination protein NusA Tax=Nitrosospira sp. APG3 RepID=M5DIM5_9PROT
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
nusA; transcription elongation factor NusA
Ig9238_scaffold_5676_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3329..5005
DNA (1677bp) protein (559aa)
Translation initiation factor IF-2 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=IF2_NITMU
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Ig9238_scaffold_5676_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5002..5925
DNA (924bp) protein (308aa)
Translation initiation factor IF-2 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=IF2_THIDA
infB; translation initiation factor IF-2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_5676_6
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5951..6340
DNA (390bp) protein (130aa)
Ribosome-binding factor A Tax=Nitrosospira sp. APG3 RepID=M5DKU1_9PROT
rbfA; ribosome-binding factor A
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Ig9238_scaffold_5676_7
unknown

Not on your lists

comp(6495..6623)
DNA (129bp) protein (43aa)

This feature has no annotations

Ig9238_scaffold_5676_8
unknown

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6886..7134
DNA (249bp) protein (83aa)

This feature has no annotations

Ig9238_scaffold_5676_9
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7238..7507
DNA (270bp) protein (90aa)
30S ribosomal protein S15P; K02956 small subunit ribosomal protein S15 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
30S ribosomal protein S15
Tax=BJP_S1_SUB10_Methylophilales_55_32
Ig9238_scaffold_5676_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7639..9777
DNA (2139bp) protein (713aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6B4K5_9PROT
Ig9238_scaffold_5676_trna_1
unknown

Not on your lists

9857..9930
DNA (74bp)
transferRNA Pro
Ig9238_scaffold_5676_trna_2
unknown

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9961..10034
DNA (74bp)
transferRNA Arg
Ig9238_scaffold_5676_trna_3
unknown

Not on your lists

10074..10145
DNA (72bp)
transferRNA His
Ig9238_scaffold_5676_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10209..11273)
DNA (1065bp) protein (355aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8U2Z1_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_5676_12
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11451..11897)
DNA (447bp) protein (149aa)
single-stranded DNA-binding protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003653AC8
smpB; SsrA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Ig9238_scaffold_5676_13
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12001..12465
DNA (465bp) protein (155aa)
cyclase Tax=Methyloversatilis sp. NVD RepID=UPI00036B2C36
oligoketide cyclase/lipid transport protein
Oligoketide cyclase/lipid transport protein {ECO:0000313|EMBL:AEV27024.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Ig9238_scaffold_5676_14
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12465..12755
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTB8_9BURK
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_62_13__curated
Ig9238_scaffold_5676_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12721..14328)
DNA (1608bp) protein (536aa)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig9238_scaffold_5676_16
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(14338..16314)
DNA (1977bp) protein (659aa)
hypothetical protein Tax=Leeia oryzae RepID=UPI000362D182
Tax=RBG_16_Chloroflexi_50_9_curated
Ig9238_scaffold_5676_17
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16356..16796)
DNA (441bp) protein (147aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI00036AB38D
hypothetical protein
Tax=GWF2_Sideroxydans_59_14_curated
Ig9238_scaffold_5676_18
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16793..17413)
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Rivularia sp. PCC 7116 RepID=K9R8K1_9CYAN
hypothetical protein
Tax=CG_Beta_01
Ig9238_scaffold_5676_19
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17530..18990
DNA (1461bp) protein (487aa)
Inositol-5-monophosphate dehydrogenase Tax=mine drainage metagenome RepID=T1BF81_9ZZZZ
inosine-5'-monophosphate dehydrogenase
Tax=GWA2_Rhodocyclales_65_20_curated
Ig9238_scaffold_5676_20
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19032..20609
DNA (1578bp) protein (526aa)
GMP synthase [glutamine-hydrolyzing] Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRW7_SIDLE
GMP synthase, large subunit
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
Ig9238_scaffold_5676_21
unknown

Not on your lists

20959..21051
DNA (93bp) protein (31aa)

This feature has no annotations

Ig9238_scaffold_5676_22

Not on your lists

comp(21024..22037)
DNA (1014bp) protein (338aa)
Protein containing DUF1814 Tax=mine drainage metagenome RepID=T1CHZ8_9ZZZZ
Protein containing DUF1814 {ECO:0000313|EMBL:EQD66985.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Ig9238_scaffold_5676_23
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22030..22626)
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Acidovorax ebreus (strain TPSY) RepID=B9MH89_ACIET
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
Ig9238_scaffold_5676_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22782..23648
DNA (867bp) protein (289aa)
Putative uncharacterized protein bin=GWE1_T_denit_62_9 species=Xanthomonas fuscans genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
WYL domain protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig9238_scaffold_5676_25
unknown

Not on your lists

comp(23852..23992)
DNA (141bp) protein (47aa)

This feature has no annotations

Ig9238_scaffold_5676_26
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24026..24934
DNA (909bp) protein (303aa)
Putative uncharacterized protein (Fragment) Tax=Ricinus communis RepID=B9TE18_RICCO
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Ig9238_scaffold_5676_27
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24931..25611
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Rhodanobacter sp. 115 RepID=I4VWW9_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Displaying items 1-30 of 33 in total

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