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Ig9238_scaffold_143284

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_143284_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..226
DNA (225bp) protein (75aa)
Type I site-specific deoxyribonuclease, HsdR family Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZUV3_DESOH
HsdR family type I site-specific deoxyribonuclease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_143284_2
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(223..723)
DNA (501bp) protein (167aa)
Na+ dependent nucleoside transporter domain protein Tax=Desulfovibrio sp. X2 RepID=S7TYL9_9DELT
sodium/nucleoside symporter family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Ig9238_scaffold_143284_3
unknown

Not on your lists

903..1358
DNA (456bp) protein (152aa)

This feature has no annotations

Ig9238_scaffold_143284_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1556..2716
DNA (1161bp) protein (387aa)
carbamoyl phosphate synthase small subunit Tax=Caldimonas manganoxidans RepID=UPI00036FB754
carA; carbamoyl-phosphate synthase small subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_143284_5
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2709..5915
DNA (3207bp) protein (1069aa)
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HI6_DECAR
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_143284_6
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5930..6406
DNA (477bp) protein (159aa)
Transcription elongation factor GreA Tax=Thauera sp. 63 RepID=N6YBL7_9RHOO
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
Ig9238_scaffold_143284_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6782..7420
DNA (639bp) protein (213aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Ribosomal RNA large subunit methyltransferase E Tax=Nitrosospira sp. APG3 RepID=M5DPN8_9PROT
ribosomal RNA methyltransferase RrmJ/FtsJ
Ig9238_scaffold_143284_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7522..9432
DNA (1911bp) protein (637aa)
hflB; cell division protein (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH Tax=Nitrosospira sp. APG3 RepID=M5DF51_9PROT
Tax=RBG_16_Betaproteobacteria_66_20_curated
Ig9238_scaffold_143284_9
RBG_19FT_COMBO_Deltaproteobacteria_56_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9521..10027)
DNA (507bp) protein (169aa)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_56_10_curated
Ig9238_scaffold_143284_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10394..11530
DNA (1137bp) protein (379aa)
Phosphoglucosamine mutase Tax=Methylovorus sp. (strain MP688) RepID=E4QJK5_METS6
phosphoglucosamine mutase
Tax=CG_Rhodocyc_01
Ig9238_scaffold_143284_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11527..13104
DNA (1578bp) protein (526aa)
glutamate-cysteine ligase (EC:6.3.2.2)
Glutamate--cysteine ligase Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q127I4_POLSJ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_143284_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13136..13408)
DNA (273bp) protein (91aa)
Molecular chaperone DnaK Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4UKG7_PSEAI
Molecular chaperone DnaK {ECO:0000313|EMBL:KGH30940.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
molecular chaperone DnaK
Ig9238_scaffold_143284_13
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13644..14870)
DNA (1227bp) protein (409aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00036F57AD
MFS transporter {ECO:0000313|EMBL:KJS35790.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
major facilitator transporter
Ig9238_scaffold_143284_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15054..15938)
DNA (885bp) protein (295aa)
Family transcriptional regulator Tax=Ralstonia sp. PBA RepID=I9BQX4_9RALS
LysR-family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Displaying 14 items

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