ggKbase home page

Ig9238_scaffold_12872

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_12872_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..158)
DNA (156bp) protein (52aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_12872_2
unknown

Not on your lists

comp(255..914)
DNA (660bp) protein (220aa)

This feature has no annotations

Ig9238_scaffold_12872_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(911..2125)
DNA (1215bp) protein (405aa)
Integrase family protein Tax=Methylobacterium sp. (strain 4-46) RepID=B0UKQ5_METS4
integrase family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_12872_4
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2556..3407
DNA (852bp) protein (284aa)
Uncharacterized protein Tax=Leptothrix ochracea L12 RepID=I4Z6B9_9BURK
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP87282.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
Ig9238_scaffold_12872_5
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3422..4174
DNA (753bp) protein (251aa)
Hypothetical truncated transposase Tax=Azoarcus sp. (strain BH72) RepID=A1K743_AZOSB
putative transposase
Hypothetical truncated transposase {ECO:0000313|EMBL:CAL94648.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Ig9238_scaffold_12872_6
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4201..4815
DNA (615bp) protein (205aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003734E16
hypothetical protein
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
Ig9238_scaffold_12872_7
unknown

Not on your lists

comp(4805..5944)
DNA (1140bp) protein (380aa)

This feature has no annotations

Ig9238_scaffold_12872_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7375..7968
DNA (594bp) protein (198aa)
Lytic transglycosylase, catalytic Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBP6_NITMU
lytic transglycosylase catalytic subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Ig9238_scaffold_12872_9
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8042..11140)
DNA (3099bp) protein (1033aa)
Membrane protein Tax=Achromobacter xylosoxidans C54 RepID=E5UD85_ALCXX
multidrug transporter AcrB
RND multidrug efflux transporter {ECO:0000313|EMBL:AHC45199.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NBRC 15126 = ATCC 27061.;"
Ig9238_scaffold_12872_10
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11154..12293)
DNA (1140bp) protein (380aa)
RND efflux membrane fusion protein Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I488_BORPD
RND efflux membrane fusion protein
RND efflux membrane fusion protein {ECO:0000313|EMBL:CAP40964.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Ig9238_scaffold_12872_11
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12441..12653)
DNA (213bp) protein (71aa)
hypothetical protein Tax=Herbaspirillum sp. JC206 RepID=UPI0002FFE1E8
Uncharacterized protein {ECO:0000313|EMBL:EZP39247.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein
Ig9238_scaffold_12872_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12831..13751
DNA (921bp) protein (307aa)
hypothetical protein Tax=Dasania marina RepID=UPI00037B8F63
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Ig9238_scaffold_12872_13
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13766..13999
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QWM6_RALPI
hypothetical protein
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
Ig9238_scaffold_12872_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14212..14433
DNA (222bp) protein (74aa)
transporter NadC family; K14445 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 bin=GWF1_Burkholderiales_GWF1_66_17 species=gamma proteobacterium HdN1 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
transporter NadC family
Tax=GWE1_Burkholderiales_65_30_curated
Ig9238_scaffold_12872_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14630..15712
DNA (1083bp) protein (361aa)
Extracellular solute-binding protein, family 7 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KT86_9BURK
TRAP dicarboxylate transporter-DctP subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_12872_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15716..16213
DNA (498bp) protein (166aa)
Tripartite ATP-independent periplasmic transporter DctQ bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Tripartite ATP-independent periplasmic transporter DctQ component
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_12872_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16225..17535
DNA (1311bp) protein (437aa)
TRAP dicarboxylate transporter DctM subunit Tax=Hylemonella gracilis ATCC 19624 RepID=F3KT84_9BURK
TRAP dicarboxylate transporter, DctM subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_12872_18
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17581..19164)
DNA (1584bp) protein (528aa)
Gamma-glutamyltranspeptidase Tax=Marinobacter nanhaiticus D15-8W RepID=N6W035_9ALTE
Gamma-glutamyltransferase {ECO:0000313|EMBL:KJB93868.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Gamma-glutamyltranspeptidase protein
Ig9238_scaffold_12872_19
unknown

Not on your lists

comp(19239..19472)
DNA (234bp) protein (78aa)

This feature has no annotations

Ig9238_scaffold_12872_20
unknown

Not on your lists

19644..20051
DNA (408bp) protein (136aa)

This feature has no annotations

Displaying 20 items

View Taxonomy