ggKbase home page

Ig9238_scaffold_13088

Search features with annotation key words

Displaying items 1-30 of 95 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_13088_1
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..465
DNA (465bp) protein (155aa)
granule protein PhaP Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000365089D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL23077.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Ig9238_scaffold_13088_2
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(541..1647)
DNA (1107bp) protein (369aa)
cca; multifunctional CCA protein (EC:3.1.3.-)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI000363D14F
Multifunctional CCA protein {ECO:0000313|EMBL:EZP38621.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
Ig9238_scaffold_13088_3
unknown

Not on your lists

comp(1670..1783)
DNA (114bp) protein (38aa)

This feature has no annotations

Ig9238_scaffold_13088_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1785..2732)
DNA (948bp) protein (316aa)
NAD-dependent epimerase/dehydratase Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X998_METSD
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_13088_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2732..4675)
DNA (1944bp) protein (648aa)
Lytic transglycosylase catalytic subunit Tax=Sulfuricella denitrificans skB26 RepID=S6A9K0_9PROT
lytic transglycosylase catalytic subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_13088_6
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4763..5929)
DNA (1167bp) protein (389aa)
Na+ antiporter NhaD Tax=Aeropyrum camini SY1 = JCM 12091 RepID=U3T7L7_9CREN
Na+ antiporter NhaD
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_13088_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6140..6850
DNA (711bp) protein (237aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00037E73A5
universal stress protein UspA-like nucleotide-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_13088_8
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7031..8041
DNA (1011bp) protein (337aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKK7_9BURK
tctC2; tricarboxylate binding receptor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Ig9238_scaffold_13088_9
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8111..8620
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ICJ8_XANP2
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Ig9238_scaffold_13088_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8663..10186
DNA (1524bp) protein (508aa)
Uncharacterized protein Tax=beta proteobacterium CB RepID=M1SFF1_9PROT
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_13088_11
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10329..11168
DNA (840bp) protein (280aa)
Transport-associated protein Tax=Variovorax paradoxus (strain EPS) RepID=E6V5A5_VARPE
transport-associated protein
Tax=GWA2_Curvibacter_64_110_curated
Ig9238_scaffold_13088_12
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11173..11670)
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21V82_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD70321.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Ig9238_scaffold_13088_13
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11749..12357)
DNA (609bp) protein (203aa)
cAMP-binding protein Tax=Collimonas fungivorans (strain Ter331) RepID=G0A8Y3_COLFT
cAMP-binding protein
Tax=GWA2_Curvibacter_64_110_curated
Ig9238_scaffold_13088_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12539..14335
DNA (1797bp) protein (599aa)
putative oxalyl-CoA decarboxylase (EC:4.1.1.8)
Thiamine pyrophosphate enzyme-like TPP binding region Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q129S6_POLSJ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Ig9238_scaffold_13088_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14423..15697
DNA (1275bp) protein (425aa)
caiB2; formyl-CoA transferase (EC:2.8.3.-)
Formyl-CoA transferase Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T0J0_JANMA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_13088_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15788..16720
DNA (933bp) protein (311aa)
formyl transferase domain-containing protein (EC:2.1.2.9)
Formyl transferase domain protein Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IFX4_METNO
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_13088_17
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16835..18955
DNA (2121bp) protein (707aa)
ATPase AAA (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPK1_9FIRM
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_13088_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18959..19441
DNA (483bp) protein (161aa)
hypothetical protein; K09129 hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_13088_19
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19279..20670)
DNA (1392bp) protein (464aa)
Glutamate synthase (Nadph), homotetrameric Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TEJ0_HELMI
gltD; glutamate synthase (nadph), homotetrameric
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_13088_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20795..22969)
DNA (2175bp) protein (725aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L5T7_9BACI
pyruvate synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_13088_21
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22966..23919)
DNA (954bp) protein (318aa)
porC; pyruvate synthase subunit PorC (EC:1.2.7.1)
Ferredoxin Tax=Brevibacillus laterosporus PE36 RepID=U4WV76_BRELA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_13088_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24010..24987)
DNA (978bp) protein (326aa)
pyruvate ferredoxin oxidoreductase subunit beta (EC:1.2.7.1)
Pyruvate ferredoxin oxidoreductase, beta subunit Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S1F1_THEOJ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_13088_23
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25003..26223)
DNA (1221bp) protein (407aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase-like protein Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RI41_MOOTA
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_13088_24
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26236..26562)
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YMN3_9BACT
pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_13088_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26577..27188)
DNA (612bp) protein (204aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1Y8P4_9BACT
pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_13088_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27334..28302
DNA (969bp) protein (323aa)
Transcriptional regulator, LysR-family Tax=Burkholderiaceae RepID=Q0K0I4_CUPNH
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_13088_27
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28332..29306
DNA (975bp) protein (325aa)
qor; NADPH:quinone reductase (EC:1.6.5.5)
NADPH:quinone reductase {ECO:0000313|EMBL:CAL95825.1}; EC=1.6.5.5 {ECO:0000313|EMBL:CAL95825.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
NADPH:quinone reductase Tax=Azoarcus sp. (strain BH72) RepID=A1KAG9_AZOSB
Ig9238_scaffold_13088_28
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29399..30358
DNA (960bp) protein (320aa)
Ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMH7_ACCPU
Ornithine cyclodeaminase {ECO:0000313|EMBL:KFB72018.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
Ig9238_scaffold_13088_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30458..33070
DNA (2613bp) protein (871aa)
hypothetical protein Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000361D3D8
serine/threonine protein kinase with Chase2 sensor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Ig9238_scaffold_13088_30
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33114..33641
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMH4_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:KFB75225.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein
Displaying items 1-30 of 95 in total

View Taxonomy