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Ig9238_scaffold_13942

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_13942_1
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76..375)
DNA (300bp) protein (100aa)
Cytochrome c5 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSM7_9BURK
Cytochrome c5 {ECO:0000313|EMBL:EHR72958.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
cytochrome c-555
Ig9238_scaffold_13942_2
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(372..1094)
DNA (723bp) protein (241aa)
Cytochrome c553 Tax=Sulfuricella denitrificans skB26 RepID=S6B8T7_9PROT
cytochrome c553
Tax=CG_Beta_01
Ig9238_scaffold_13942_3
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1091..1552)
DNA (462bp) protein (154aa)
Cytochrome c4 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR24_RUBGI
cytochrome c4
Tax=CG_Beta_01
Ig9238_scaffold_13942_4
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1562..2845)
DNA (1284bp) protein (428aa)
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_42_51 species=Pelodictyon luteolum genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=CG_Beta_01
Ig9238_scaffold_13942_5
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3074..4489
DNA (1416bp) protein (472aa)
Integral membrane sensor signal transduction histidine kinase Tax=Sulfuricella denitrificans skB26 RepID=S6A9I8_9PROT
Histidine kinase {ECO:0000313|EMBL:GAO36400.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
integral membrane sensor signal transduction histidine kinase
Ig9238_scaffold_13942_6
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4482..5132
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CN28_SIDLE
LuxR family transcriptional regulator
Tax=GWA2_Rhodocyclales_65_20_curated
Ig9238_scaffold_13942_trna_1
unknown

Not on your lists

comp(5173..5243)
DNA (71bp)
transferRNA Gly
Ig9238_scaffold_13942_7
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5377..5583
DNA (207bp) protein (69aa)
Thiamine biosynthesis protein ThiS Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z2Z1_9RHOO
thiS; thiamine biosynthesis protein ThiS
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Ig9238_scaffold_13942_8
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5583..6374
DNA (792bp) protein (264aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443, ECO:0000313|EMBL:AJP49378.1}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
thiazole synthase Tax=Azoarcus toluclasticus RepID=UPI0003730672
thiazole synthase
Ig9238_scaffold_13942_9
unknown

Not on your lists

comp(6371..6961)
DNA (591bp) protein (197aa)

This feature has no annotations

Ig9238_scaffold_13942_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7039..7737
DNA (699bp) protein (233aa)
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=TRMB_NITMU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_13942_11
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7734..8105
DNA (372bp) protein (124aa)
Putative uncharacterized protein Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2VYY1_MAGSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO28835.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Ig9238_scaffold_13942_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8185..8988
DNA (804bp) protein (268aa)
folE; GTP cyclohydrolase FolE2 (EC:3.5.4.16)
GTP cyclohydrolase Tax=Thiobacillus denitrificans RepID=UPI000361EDF5
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_13942_13
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9005..9625)
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Herminiimonas arsenicoxydans RepID=A4G3G4_HERAR
signal peptide
Uncharacterized protein {ECO:0000313|EMBL:CAL61051.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
Ig9238_scaffold_13942_14
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9641..10369
DNA (729bp) protein (243aa)
glutamine amidotransferase Tax=Thiobacillus thioparus RepID=UPI00035E22D2
glutamine amidotransferase class-I
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
Ig9238_scaffold_13942_15
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10372..10857)
DNA (486bp) protein (162aa)
nucleotide-binding protein Tax=Burkholderia sp. JPY347 RepID=UPI0003813A76
UPF0234 protein HMPREF0551_0352 {ECO:0000256|HAMAP-Rule:MF_00632}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
hypothetical protein YajQ
Ig9238_scaffold_13942_16
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10872..12092)
DNA (1221bp) protein (407aa)
Argininosuccinate synthase Tax=Proteobacteria RepID=M5DIN4_9PROT
argininosuccinate synthase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_13942_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12129..13043)
DNA (915bp) protein (305aa)
ornithine carbamoyltransferase Tax=Thiobacillus denitrificans RepID=UPI000374D6C1
argF; ornithine carbamoyltransferase
Tax=GWE1_Thiobacillus_62_9_curated
Ig9238_scaffold_13942_18

Not on your lists

comp(13049..14245)
DNA (1197bp) protein (399aa)
Acetylornithine and succinylornithine aminotransferase {ECO:0000313|EMBL:EQD73271.1}; EC=2.6.1.- {ECO:0000313|EMBL:EQD73271.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Acetylornithine and succinylornithine aminotransferase Tax=mine drainage metagenome RepID=T1BJY0_9ZZZZ
acetylornithine/succinylornithine aminotransferase
Ig9238_scaffold_13942_19
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14402..14674)
DNA (273bp) protein (91aa)
30S ribosomal protein S20 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRJ2_ACCPU
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Ig9238_scaffold_13942_20
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14805..16337
DNA (1533bp) protein (511aa)
Virulence factor MVIN-like protein Tax=Dechloromonas aromatica (strain RCB) RepID=Q47I67_DECAR
virulence factor MVIN-like
Tax=GWA2_Gallionellales_55_18_curated
Ig9238_scaffold_13942_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16358..17227
DNA (870bp) protein (290aa)
Riboflavin kinase bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
riboflavin kinase/FMN adenylyltransferase
Tax=GWE1_Thiobacillus_62_9_curated
Ig9238_scaffold_13942_22
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17227..19965
DNA (2739bp) protein (913aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
Isoleucine--tRNA ligase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5N0_NITMU
ileS; isoleucyl-tRNA synthetase
Ig9238_scaffold_13942_23
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19958..20464
DNA (507bp) protein (169aa)
signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase Tax=Nitrosospira sp. APG3 RepID=M5DWJ9_9PROT
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Ig9238_scaffold_13942_24
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20477..21430
DNA (954bp) protein (318aa)
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase Tax=Sulfuricella denitrificans skB26 RepID=S6B5Y4_9PROT
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_13942_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21479..22006)
DNA (528bp) protein (176aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein Tax=Variovorax sp. CF313 RepID=J2K892_9BURK
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EJL76455.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
Ig9238_scaffold_13942_26
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22021..22641)
DNA (621bp) protein (207aa)
Type IV pilus assembly protein, PilY1-like protein Tax=Azotobacter vinelandii RepID=C1DPI4_AZOVD
pilY1; type IV pilus assembly protein, PilY1-like protein
Tax=CG_Beta_01
Ig9238_scaffold_13942_27
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22581..24911)
DNA (2331bp) protein (777aa)
hypothetical protein Tax=Pseudomonas nitroreducens RepID=UPI0002E3AEFF
hypothetical protein
Tax=CG_Beta_01
Ig9238_scaffold_13942_28
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24938..25375)
DNA (438bp) protein (146aa)
hypothetical protein Tax=Pseudomonas nitroreducens RepID=UPI0002E3E77A
Hypothetical protein
Tax=CG_Beta_01
Ig9238_scaffold_13942_29
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25429..26664)
DNA (1236bp) protein (412aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein Tax=Variovorax sp. CF313 RepID=J2TDW3_9BURK
type 4 fimbrial biogenesis PilW-like protein transmembrane
Tax=CG_Beta_01
Displaying items 1-30 of 32 in total

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