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Ig9238_scaffold_22928

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_22928_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..843)
DNA (843bp) protein (281aa)
Type IV pilus biogenesis protein PilJ Tax=Nitrosospira sp. APG3 RepID=M5DUH3_9PROT
methyl-accepting chemotaxis sensory transducer
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Ig9238_scaffold_22928_2
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(884..1030)
DNA (147bp) protein (49aa)
Methyl-accepting chemotaxis protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LR59_SYNAS
methyl-accepting chemotaxis protein
Tax=RBG_16_Gallionellales_57_15_curated
Ig9238_scaffold_22928_3
unknown

Not on your lists

1239..1406
DNA (168bp) protein (56aa)

This feature has no annotations

Ig9238_scaffold_22928_4
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2157..3185)
DNA (1029bp) protein (343aa)
NMT1/THI5 like domain protein bin=GWB2_Desulfobacterales_56_26 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
NMT1/THI5 like domain-containing protein
Tax=GWB2_Desulfobacterales_56_26_curated
Ig9238_scaffold_22928_5
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3250..4440)
DNA (1191bp) protein (397aa)
Methyl-accepting chemotaxis sensory transducer bin=GWE2_Gallionellales_58_10 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
mcp40H-21; methyl-accepting chemotaxis sensory transducer, class 40H
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Ig9238_scaffold_22928_6
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4505..5149)
DNA (645bp) protein (215aa)
CheW protein bin=GWE2_Gallionellales_58_10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
cheW40H-5; scaffold protein CheW associated with MCPs of class 40H
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Ig9238_scaffold_22928_7
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5153..6553)
DNA (1401bp) protein (467aa)
CheR-type MCP methyltransferase (EC:2.1.1.80)
MCP methyltransferase, CheR-type bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Ig9238_scaffold_22928_8
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6555..6971)
DNA (417bp) protein (139aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000367E3A2
CheW protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Ig9238_scaffold_22928_9
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(7185..7832)
DNA (648bp) protein (216aa)
DNA-binding response regulator, LuxR family Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z7M1_DEHE1
LuxR family transcriptional regulator
Tax=RBG_13_Chloroflexi_60_13_curated
Ig9238_scaffold_22928_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7829..9319)
DNA (1491bp) protein (497aa)
Multi-sensor signal transduction histidine kinase bin=GWC2_Chloroflexi_73_18 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
response regulator
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_22928_11
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9484..10404)
DNA (921bp) protein (307aa)
Metal-dependent hydrolase Tax=Herbaspirillum frisingense GSF30 RepID=R0G5U9_9BURK
Metal-dependent hydrolase {ECO:0000313|EMBL:EOA05089.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
metal-dependent hydrolase
Ig9238_scaffold_22928_12
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10435..10905)
DNA (471bp) protein (157aa)
Endoribonuclease L-PSP Tax=Caenispirillum salinarum AK4 RepID=K9GPD5_9PROT
endoribonuclease L-PSP family protein
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
Ig9238_scaffold_22928_13
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10930..12294)
DNA (1365bp) protein (455aa)
Enoyl-CoA hydratase Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXQ5_PUSST
enoyl-CoA hydratase
Enoyl-CoA hydratase {ECO:0000313|EMBL:AEC21486.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
Ig9238_scaffold_22928_14
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12319..12894)
DNA (576bp) protein (192aa)
TRAP-type mannitol/chloroaromatic compound transporter small permease Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXQ6_PUSST
TRAP-type mannitol/chloroaromatic compound transporter small permease
TRAP-type mannitol/chloroaromatic compound transporter small permease {ECO:0000313|EMBL:AEC21487.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
Ig9238_scaffold_22928_15
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12916..13980)
DNA (1065bp) protein (355aa)
Extracellular solute-binding protein, family 7 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXQ7_PUSST
extracellular solute-binding protein, family 7
Extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:AEC21488.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
Ig9238_scaffold_22928_16
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13977..14477)
DNA (501bp) protein (167aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI00031C65C9
Uncharacterized protein {ECO:0000313|EMBL:EOA05090.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
hypothetical protein
Ig9238_scaffold_22928_17
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14674..15300
DNA (627bp) protein (209aa)
Transcriptional regulator, AraC family Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SWC8_JANMA
Glutamine amidotransferase {ECO:0000313|EMBL:KJC61029.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
AraC family transcriptional regulator
Ig9238_scaffold_22928_18
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15252..15923
DNA (672bp) protein (224aa)
Cro/CI family transcriptional regulator Tax=Herbaspirillum frisingense GSF30 RepID=R0EHR5_9BURK
Cro/CI family transcriptional regulator {ECO:0000313|EMBL:EOA05085.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
Cro/CI family transcriptional regulator
Ig9238_scaffold_22928_19
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16446..17072
DNA (627bp) protein (209aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRL8_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR72798.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
Ig9238_scaffold_22928_20
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17126..18694
DNA (1569bp) protein (523aa)
gluconate 2-dehydrogenase (EC:1.1.99.3)
Choline dehydrogenase-like flavoprotein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRL7_9BURK
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:EHR72797.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Ig9238_scaffold_22928_21
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

18720..19301
DNA (582bp) protein (194aa)
Glutamine amidotransferase Tax=Ralstonia sp. AU12-08 RepID=S9RWA0_9RALS
Glutamine amidotransferase {ECO:0000313|EMBL:KIE11682.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
glutamine amidotransferase
Ig9238_scaffold_22928_22
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19329..19682
DNA (354bp) protein (118aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00036904DD
Arylsulfate sulfotransferase-like protein {ECO:0000313|EMBL:EHR72796.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
arylsulfate sulfotransferase
Ig9238_scaffold_22928_23
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19708..20103
DNA (396bp) protein (132aa)
Lactoylglutathione lyase-like lyase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRL5_9BURK
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EHR72795.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
glyoxalase/bleomycin resistance protein/dioxygenase
Ig9238_scaffold_22928_24
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(20325..20648)
DNA (324bp) protein (108aa)
Plasmid stabilization system Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAD8_GEOUR
plasmid stabilization system protein
Tax=RBG_16_Nitrospirae_64_22_curated
Ig9238_scaffold_22928_25
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(20626..20913)
DNA (288bp) protein (96aa)
Prevent-host-death protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Methanospirillum hungatei genus=Methanospirillum taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
prevent-host-death protein
Tax=RBG_16_Nitrospirae_64_22_curated
Ig9238_scaffold_22928_26
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20982..21521)
DNA (540bp) protein (180aa)
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent Tax=Thauera RepID=N6Y881_9RHOO
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_22928_27
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21604..21981
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JP72_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Ig9238_scaffold_22928_28
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

21986..22246
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Halothece sp. (strain PCC 7418) RepID=K9Y8Y8_HALP7
hypothetical protein
Tax=RBG_16_Nitrospirae_64_22_curated
Displaying 28 items

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