ggKbase home page

Ig9238_scaffold_19566

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_19566_1
unknown

Not on your lists

1..66
DNA (66bp) protein (22aa)

This feature has no annotations

Ig9238_scaffold_19566_2
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95..1063
DNA (969bp) protein (323aa)
PEGA domain protein bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
PEGA domain-containing protein
Tax=CG_Beta_01
Ig9238_scaffold_19566_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1121..2254
DNA (1134bp) protein (378aa)
A/G-specific adenine glycosylase Tax=Thauera phenylacetica B4P RepID=N6ZT84_9RHOO
A/G-specific adenine glycosylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_19566_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2187..2807)
DNA (621bp) protein (207aa)
Peptidase S16, lon N-terminal Tax=Dechloromonas aromatica (strain RCB) RepID=Q47K06_DECAR
peptidase S16, lon N-terminal
Peptidase S16, lon N-terminal {ECO:0000313|EMBL:AAZ44825.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Ig9238_scaffold_19566_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2821..3663)
DNA (843bp) protein (281aa)
hypothetical protein; K06958 UPF0042 nucleotide-binding protein bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_19566_6
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3663..4631)
DNA (969bp) protein (323aa)
HPr kinase/phosphorylase (EC:2.7.11.-)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
HPr kinase Tax=Aquaspirillum serpens RepID=UPI0003B536ED
Ig9238_scaffold_19566_7
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4600..5148)
DNA (549bp) protein (183aa)
PTS IIA-like nitrogen-regulatory protein PtsN Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QH19_AZOSU
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
Ig9238_scaffold_19566_8
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5117..5410)
DNA (294bp) protein (98aa)
Sigma 54 modulation protein/ribosomal protein S30EA Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SJ50_GALCS
sigma 54 modulation protein/ribosomal protein S30EA
Tax=GWA2_Gallionellales_59_43_curated
Ig9238_scaffold_19566_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5434..6861)
DNA (1428bp) protein (476aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase sigma-54 factor bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_19566_10
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6940..7548)
DNA (609bp) protein (203aa)
ABC transporter related Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SJ48_GALCS
ABC transporter
Tax=GWA2_Gallionellales_60_142_curated
Ig9238_scaffold_19566_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7545..8165)
DNA (621bp) protein (207aa)
OstA-like protein Tax=Sulfuricella denitrificans skB26 RepID=S6AEZ8_9PROT
OstA-like protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_19566_12
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8165..8689)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6B131_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34407.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Ig9238_scaffold_19566_13
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8735..9271)
DNA (537bp) protein (179aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Tax=Herbaspirillum sp. JC206 RepID=UPI00031AF8A4
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Tax=RBG_16_Betaproteobacteria_66_20_curated
Ig9238_scaffold_19566_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9327..10331)
DNA (1005bp) protein (335aa)
capsule expression protein KpsF/GutQ; K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
arabinose-5-phosphate isomerase (EC:5.3.1.13)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Ig9238_scaffold_19566_15
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10385..12352
DNA (1968bp) protein (656aa)
Potassium efflux system protein Tax=Sulfuricella denitrificans skB26 RepID=S6A9N3_9PROT
potassium efflux system protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_19566_16
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12521..14215
DNA (1695bp) protein (565aa)
Uncharacterized protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P184_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI08930.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
Displaying 16 items

View Taxonomy