name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
Ig9238_scaffold_2218_1
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..1302
|
cytochrome oxidase subunit I Tax=Acidovorax radicis RepID=UPI00023770A3
cbb3-type cytochrome c oxidase subunit I
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
|
|
Ig9238_scaffold_2218_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1342..1956
|
ccoO; cbb3-type cytochrome c oxidase subunit II (EC:1.9.3.1)
peptidase S41 Tax=Massilia niastensis RepID=UPI00037480B9
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:EIJ36615.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
|
|
Ig9238_scaffold_2218_3
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1961..2128
|
Cbb3-type cytochrome oxidase component Tax=Hylemonella gracilis ATCC 19624 RepID=F3KPD6_9BURK
Cytochrome oxidase {ECO:0000313|EMBL:EYC51141.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
Cbb3-type cytochrome oxidase component
|
|
Ig9238_scaffold_2218_4
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2125..3039
|
cbb3-type cytochrome C oxidase subunit III (EC:1.9.3.1)
Cbb3-type cytochrome c oxidase subunit Tax=Herminiimonas arsenicoxydans RepID=A4G5L2_HERAR
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
|
|
Ig9238_scaffold_2218_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3096..4505
|
4Fe-4S ferredoxin bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
ccoG; iron-sulfur 4Fe-4S ferredoxin transmembrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
|
|
Ig9238_scaffold_2218_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4502..5017
|
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRZ5_ACCPU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
|
|
Ig9238_scaffold_2218_7
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5057..5365
|
hypothetical protein bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
Ig9238_scaffold_2218_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5391..8159)
|
acetyl-CoA synthetase Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035F13AB
CoA-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
|
|
Ig9238_scaffold_2218_9
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8169..8576)
|
C4-type zinc finger DksA/TraR family protein bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
C4-type zinc finger DksA/TraR family protein
Conjugal transfer protein TraR {ECO:0000313|EMBL:KFI19075.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
|
|
Ig9238_scaffold_2218_10
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8576..8905)
|
Universal stress protein Tax=Proteobacteria RepID=D9Y2G4_9BURK
Universal stress family protein {ECO:0000313|EMBL:CCX86455.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
putative universal stress protein UspA/Adenine nucleotide alpha hydrolases-like
|
|
Ig9238_scaffold_2218_11
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9015..9755)
|
Cyclic nucleotide-binding:Bacterial regulatory protein, Crp Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H78_DECAR
cAMP-binding protein
Tax=GWA2_Rhodocyclales_65_20_curated
|
|
Ig9238_scaffold_2218_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9844..11277
|
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Coproporphyrinogen-III oxidase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CM50_SIDLE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
|
|
Ig9238_scaffold_2218_13
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11305..12018
|
membrane protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003760E36
Uncharacterized protein {ECO:0000313|EMBL:EXI86401.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
|
|
Ig9238_scaffold_2218_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12167..12799
|
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQN2_9BURK
carboxymuconolactone decarboxylase
Tax=CG_Rhodocyc_01
|
|
Ig9238_scaffold_2218_15
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12818..13696)
|
hypothetical protein
hypothetical protein; K06940 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
|
|
Ig9238_scaffold_2218_16
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13846..15882)
|
Adenylylsulfate reductase subunit alpha bin=GWE2_Gallionellales_58_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
aprA; adenylylsulfate reductase subunit alpha
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
|
|
Ig9238_scaffold_2218_17
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15927..16403)
|
APS reductase beta subunit bin=GWE2_Gallionellales_58_10 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
aprB; adenylylsulfate reductase subunit beta
Tax=RBG_16_Betaproteobacteria_56_24_curated
|
|
Ig9238_scaffold_2218_18
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16453..17661)
|
sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSK9_SIDLE
Tax=GWA2_Gallionellales_60_18_curated
|
|
Ig9238_scaffold_2218_19
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17711..18691)
|
DMSO reductase anchor subunit (DmsC) Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSK6_SIDLE
DMSO reductase anchor subunit (DmsC)
DMSO reductase anchor subunit (DmsC) {ECO:0000313|EMBL:BAO30538.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
|
|
Ig9238_scaffold_2218_20
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18701..19432)
|
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSK7_SIDLE
4Fe-4S ferredoxin iron-sulfur binding domain protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
|
|
Ig9238_scaffold_2218_21
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19693..20892
|
GAF sensor signal transduction histidine kinase (EC:2.7.3.-); K07673 two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
GAF sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
|
|
Ig9238_scaffold_2218_22
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20896..21549
|
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQP6_9BURK
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:BAP87448.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
|
|
Ig9238_scaffold_2218_23
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21569..22354)
|
Siroheme synthase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSG9_SIDLE
Siroheme synthase {ECO:0000256|HAMAP-Rule:MF_01646}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
uroporphyrin-III C-methyltransferase
|
|
Ig9238_scaffold_2218_24
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22351..22650)
|
HesB/YadR/YfhF-family protein Tax=Sulfuricella denitrificans skB26 RepID=S6AB38_9PROT
dsrR; HesB/YadR/YfhF-family protein
Tax=CG_Beta_01
|
|
Ig9238_scaffold_2218_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22682..24079)
|
Cobyrinic acid A,C-diamide synthase Tax=Sulfuricella denitrificans skB26 RepID=S6AJI2_9PROT
dsrN; cobyrinic acid a,c-diamide synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
|
|
Ig9238_scaffold_2218_26
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24099..25268)
|
Formate-dependent nitrite reductase, membrane component {ECO:0000313|EMBL:EWS63610.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
Polysulfide reductase bin=GWE1_Burkholderiales_65_30 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
polysulfide reductase NrfD
|
|
Ig9238_scaffold_2218_27
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25299..26057)
|
iron-sulfur cluster protein; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tetrathionate reductase subunit B {ECO:0000313|EMBL:GAO32855.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
dsrO; 4Fe-4S ferredoxin iron-sulfur binding domain protein
|
|
Ig9238_scaffold_2218_28
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26054..26473)
|
hypothetical protein bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
dsrJ; hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
|
|
Ig9238_scaffold_2218_29
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26482..28431)
|
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSH5_SIDLE
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
|
|
Ig9238_scaffold_2218_30
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28472..29998)
|
Putative uncharacterized protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSH6_SIDLE
hypothetical protein
Tax=GWA2_Gallionellales_59_43_curated
|