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Ig9238_scaffold_41139

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_41139_1
unknown

Not on your lists

comp(17..424)
DNA (408bp) protein (136aa)

This feature has no annotations

Ig9238_scaffold_41139_2
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(414..1037)
DNA (624bp) protein (208aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6A9N4_9PROT
hypothetical protein
Tax=CG_Beta_01
Ig9238_scaffold_41139_3
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1034..2668)
DNA (1635bp) protein (545aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AF04_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO35890.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
Ig9238_scaffold_41139_4
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2675..3877)
DNA (1203bp) protein (401aa)
Type II secretion system protein Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AJ4_DECAR
type II secretion system protein
Tax=BJP_IG2103_Dechloromonas_60_92
Ig9238_scaffold_41139_5
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3887..5602)
DNA (1716bp) protein (572aa)
Type II secretion system protein E Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RLS9_ACCPU
Type II traffic warden ATPase {ECO:0000313|EMBL:EXI85275.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
type II secretion system protein E
Ig9238_scaffold_41139_6
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5605..6843)
DNA (1239bp) protein (413aa)
Putative tetratricopeptide TPR_2 repeat protein Tax=Methyloversatilis universalis FAM5 RepID=F5RDP6_9RHOO
Putative tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EGK71027.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
hypothetical protein
Ig9238_scaffold_41139_7
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6840..8750)
DNA (1911bp) protein (637aa)
General secretion pathway protein D Tax=Sulfuricella denitrificans skB26 RepID=S6A9N5_9PROT
Type II and III secretion system protein {ECO:0000313|EMBL:GAO35886.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
general secretion pathway protein D
Ig9238_scaffold_41139_8
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8890..10296)
DNA (1407bp) protein (469aa)
Type II secretory pathway, component ExeA (Predicted ATPase) Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QN06_AZOSU
type II secretory pathway protein ExeA
Type II secretory pathway, component ExeA (Predicted ATPase) {ECO:0000313|EMBL:AEV25791.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Ig9238_scaffold_41139_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10316..11767)
DNA (1452bp) protein (484aa)
Two Component Transcriptional Regulator, Fis family bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Fis family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_41139_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11956..12705
DNA (750bp) protein (250aa)
ABC transporter, ATPase subunit Tax=mine drainage metagenome RepID=E6QQQ1_9ZZZZ
toluene ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_41139_11
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12698..13495
DNA (798bp) protein (266aa)
ABC transporter permease Tax=Thiobacillus denitrificans RepID=UPI000378D033
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Ig9238_scaffold_41139_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13553..14023
DNA (471bp) protein (157aa)
ABC transporter substrate-binding protein Tax=Cupriavidus sp. WS RepID=UPI0003781AE5
mammalian cell entry related domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Ig9238_scaffold_41139_13
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14090..14740
DNA (651bp) protein (217aa)
Signal peptide protein Tax=Sulfuricella denitrificans skB26 RepID=S6A9N6_9PROT
signal peptide protein
Signal peptide protein {ECO:0000313|EMBL:BAN34425.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Ig9238_scaffold_41139_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14737..15039
DNA (303bp) protein (101aa)
STAS domain Tax=Nitrosospira sp. APG3 RepID=M5DHE5_9PROT
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_41139_15
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15164..15886
DNA (723bp) protein (241aa)
ABC transporter Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y4W5_9RHOO
ATP-binding ABC transporter protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
Ig9238_scaffold_41139_16
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15883..16641
DNA (759bp) protein (253aa)
metal-dependent hydrolase Tax=Aquaspirillum serpens RepID=UPI0003B6B09D
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
transmenbrane protein
Ig9238_scaffold_41139_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16649..16888
DNA (240bp) protein (80aa)
hypothetical protein Tax=beta proteobacterium L13 RepID=UPI000380F854
BolA family transcriptional regulator {ECO:0000313|EMBL:KGF81445.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
BolA family protein
Ig9238_scaffold_41139_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16933..18183
DNA (1251bp) protein (417aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_41139_19
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18194..18832
DNA (639bp) protein (213aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
ATP phosphoribosyltransferase Tax=Burkholderia ubonensis RepID=UPI00016A3B36
Ig9238_scaffold_41139_20
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18825..20132
DNA (1308bp) protein (436aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
Histidinol dehydrogenase Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1DAJ9_LARHH
Ig9238_scaffold_41139_21
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20129..21199
DNA (1071bp) protein (357aa)
Histidinol-phosphate aminotransferase Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J188_PSEUL
histidinol-phosphate aminotransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Ig9238_scaffold_41139_22
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21204..21791
DNA (588bp) protein (196aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=HIS7_BORPD
Tax=RBG_16_Betaproteobacteria_64_18_curated
Ig9238_scaffold_41139_23
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21830..22465
DNA (636bp) protein (212aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH Tax=Azoarcus sp. (strain BH72) RepID=A1KAV6_AZOSB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Ig9238_scaffold_41139_24
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22488..23225
DNA (738bp) protein (246aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Tax=Methylophilus RepID=UPI00037BE3B4
Tax=BJP_S1_SUB10_Methylophilales_55_32
Ig9238_scaffold_41139_25
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23265..24026
DNA (762bp) protein (254aa)
hisF; imidazole glycerol-phosphate synthase (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF Tax=Herbaspirillum sp. GW103 RepID=I3CS84_9BURK
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_41139_26
Pseudomonas psychrotolerans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24036..24434
DNA (399bp) protein (133aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas psychrotolerans L19.;"
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase Tax=Pseudomonas psychrotolerans L19 RepID=H0JFX2_9PSED
Ig9238_scaffold_41139_27
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24424..24753
DNA (330bp) protein (110aa)
Phosphoribosyl-ATP pyrophosphatase Tax=uncultured gamma proteobacterium RepID=H5SD73_9GAMM
phosphoribosyl-ATP diphosphatase
Tax=CG_Beta_01
Ig9238_scaffold_41139_28
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24753..25109
DNA (357bp) protein (119aa)
HIT family hydrolase Tax=Azoarcus toluclasticus RepID=UPI0003665D98
hitA; HIT (histidine triad) family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Ig9238_scaffold_41139_29
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25131..25349
DNA (219bp) protein (73aa)
tatA; twin arginine translocase protein A; K03116 sec-independent protein translocase protein TatA bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
twin arginine-targeting protein translocase, TatA/E family
Ig9238_scaffold_41139_30
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25387..25845
DNA (459bp) protein (153aa)
Sec-independent protein translocase protein TatB Tax=Thauera RepID=C4ZLR9_THASP
twin-arginine translocation protein subunit TatB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Displaying items 1-30 of 41 in total

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