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Ig9238_scaffold_27502

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_27502_1
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..160
DNA (159bp) protein (53aa)
BsuBIPstI restriction endonuclease domain-containing protein Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZR36_ACICS
BsuBIPstI restriction endonuclease domain-containing protein
BsuBIPstI restriction endonuclease domain-containing protein {ECO:0000313|EMBL:AEK58731.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
Ig9238_scaffold_27502_2
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235..2145
DNA (1911bp) protein (637aa)
UvrABC system protein B Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YRM9_9RHOO
excinuclease ABC subunit B
Tax=CG_Beta_01
Ig9238_scaffold_27502_3
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2138..2626
DNA (489bp) protein (163aa)
protein tyrosine phosphatase (EC:3.1.3.48)
Protein tyrosine phosphatase Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A8Q7_ALKEH
Protein tyrosine phosphatase {ECO:0000313|EMBL:ABI56780.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
Ig9238_scaffold_27502_4
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2645..3214
DNA (570bp) protein (190aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TXJ1_9BRAD
peroxidase-like protein
Ig9238_scaffold_27502_5
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3240..3875)
DNA (636bp) protein (212aa)
DSBA oxidoreductase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQF8_ACCPU
2-hydroxychromene-2-carboxylate isomerase {ECO:0000313|EMBL:EXI84421.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
DSBA oxidoreductase
Ig9238_scaffold_27502_6
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3878..6691)
DNA (2814bp) protein (938aa)
RNAse E (EC:3.1.4.-)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
Ribonuclease E Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46YZ5_CUPPJ
Ig9238_scaffold_27502_7
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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7063..8034
DNA (972bp) protein (324aa)
rluC; ribosomal large subunit pseudouridine synthase c (EC:5.4.99.-)
Pseudouridine synthase Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R5K6_CUPTR
Tax=RBG_16_Betaproteobacteria_58_11_curated
Ig9238_scaffold_27502_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8031..8684
DNA (654bp) protein (218aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZL9_LEPCP
HAD family hydrolase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Ig9238_scaffold_27502_9
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8663..9052
DNA (390bp) protein (130aa)
Rieske (2Fe-2S) protein Tax=Cupriavidus sp. WS RepID=UPI00037898C0
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:AEV26797.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Ig9238_scaffold_27502_10
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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9049..10017
DNA (969bp) protein (323aa)
Peptidase S49 Tax=Sulfuricella denitrificans skB26 RepID=S6AH13_9PROT
peptidase S49
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
Ig9238_scaffold_27502_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10022..12919
DNA (2898bp) protein (966aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DLX0_9BURK
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_27502_12
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12916..13650)
DNA (735bp) protein (245aa)
hypothetical protein Tax=Chitiniphilus shinanonensis RepID=UPI0003743963
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Ig9238_scaffold_27502_13
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13647..14027)
DNA (381bp) protein (127aa)
Maf-like protein CAP2UW1_1532 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTM1_ACCPU
septum formation inhibitor Maf
Tax=GWA2_Rhodocyclales_65_20_curated
Ig9238_scaffold_27502_14
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14280..14783
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Methylovorus RepID=C6XDL1_METSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT50636.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
Ig9238_scaffold_27502_15
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14808..14984
DNA (177bp) protein (59aa)
50S ribosomal protein L32 Tax=Azoarcus sp. KH32C RepID=H0PU37_9RHOO
rpmF; 50S ribosomal protein L32
Tax=RBG_16_Gallionellales_56_9_curated
Ig9238_scaffold_27502_16
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15073..16131
DNA (1059bp) protein (353aa)
Phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; EC=2.3.1.n2 {ECO:0000255|HAMAP-Rule:MF_00019};; Acyl-ACP phosphotransacylase {ECO:0000255|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
Phosphate acyltransferase Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=PLSX_METFK
glycerol-3-phosphate acyltransferase
Ig9238_scaffold_27502_17
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16151..17107
DNA (957bp) protein (319aa)
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:AKH37496.1}; EC=2.3.1.180 {ECO:0000313|EMBL:AKH37496.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
fabH; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=FABH_NITEU
Ig9238_scaffold_27502_18
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17115..18035
DNA (921bp) protein (307aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Malonyl CoA-acyl carrier protein transacylase Tax=Azoarcus sp. KH32C RepID=H0PU34_9RHOO
fabD; [acyl-carrier-protein] S-malonyltransferase
Ig9238_scaffold_27502_19
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18043..18783
DNA (741bp) protein (247aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:GAO32742.1}; EC=1.1.1.100 {ECO:0000313|EMBL:GAO32742.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMH4_AZOSU
3-oxoacyl-(acyl-carrier-protein) reductase
Ig9238_scaffold_27502_20
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18874..19113
DNA (240bp) protein (80aa)
acyl carrier protein Tax=Uliginosibacterium gangwonense RepID=UPI00036845C3
acpP; acyl carrier protein
Tax=BJP_IG2103_Rhodocyclales_63_50
Ig9238_scaffold_27502_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19202..20437
DNA (1236bp) protein (412aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II, FabF (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNM2_9BURK
Ig9238_scaffold_27502_22
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20467..21288
DNA (822bp) protein (274aa)
Aminodeoxychorismate lyase bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
aminodeoxychorismate lyase
Tax=RBG_16_Gallionellales_57_15_curated
Ig9238_scaffold_27502_23
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21538..22200
DNA (663bp) protein (221aa)
Aminodeoxychorismate lyase Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H168_METFK
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ABE49769.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
Ig9238_scaffold_27502_24
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22197..23192
DNA (996bp) protein (332aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes OXCC13.;"
tmk; thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase Tax=Oxalobacter formigenes OXCC13 RepID=C3X9N8_OXAFO
Ig9238_scaffold_27502_25

Not on your lists

23189..23731
DNA (543bp) protein (181aa)
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:CBI10017.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBI10017.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA polymerase III, delta prime subunit Tax=mine drainage metagenome RepID=E6QRZ5_9ZZZZ
DNA polymerase III subunit delta'
Ig9238_scaffold_27502_26
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23735..24103
DNA (369bp) protein (123aa)
Type IV pilus assembly PilZ Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DZ7_DECAR
Uncharacterized protein {ECO:0000313|EMBL:EXI68946.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
Type IV pilus assembly PilZ
Displaying 26 items

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