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Ig9238_scaffold_47516

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_47516_1
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..307)
DNA (306bp) protein (102aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
NADPH-dependent 7-cyano-7-deazaguanine reductase Tax=Hydrocarboniphaga effusa AP103 RepID=I7Z9B3_9GAMM
Ig9238_scaffold_47516_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

985..3873
DNA (2889bp) protein (963aa)
Chromosome partition protein Smc Tax=Sulfuricella denitrificans skB26 RepID=S6ALD0_9PROT
chromosome segregation protein SMC
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Ig9238_scaffold_47516_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3884..4969
DNA (1086bp) protein (362aa)
Cell division protein ZipA Tax=Nitrosospira sp. APG3 RepID=M5DNN8_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_47516_4
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4972..6990
DNA (2019bp) protein (673aa)
ligA; DNA ligase (EC:6.5.1.2)
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
NAD-dependent DNA ligase LigA Tax=Cupriavidus sp. UYPR2.512 RepID=UPI000370590F
Ig9238_scaffold_47516_5
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6998..7885
DNA (888bp) protein (296aa)
UTP--glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6AH79_9PROT
Tax=RBG_16_Betaproteobacteria_58_11_curated
Ig9238_scaffold_47516_6
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8414..9094
DNA (681bp) protein (227aa)
5''''-methylthioadenosine phosphorylase Tax=Azoarcus toluclasticus RepID=UPI0003604E5F
mtap; 5'-methylthioadenosine phosphorylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
Ig9238_scaffold_47516_7
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9105..9617
DNA (513bp) protein (171aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
Peptide deformylase Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H1A3_METFK
Ig9238_scaffold_47516_8
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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9661..10035
DNA (375bp) protein (125aa)
Transmembrane protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNK1_SIDLE
transmembrane protein
Transmembrane protein {ECO:0000313|EMBL:ADE10914.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
Ig9238_scaffold_47516_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10046..12643)
DNA (2598bp) protein (866aa)
Bifunctional uridylyltransferase/uridylyl-removing enzyme Tax=Sulfuricella denitrificans skB26 RepID=S6ALA3_9PROT
PII uridylyl-transferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Ig9238_scaffold_47516_10
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12684..13472)
DNA (789bp) protein (263aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
map; methionine aminopeptidase
Tax=BJP_S1_SUB10_Methylophilales_55_32
Ig9238_scaffold_47516_11
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13811..14188
DNA (378bp) protein (126aa)
hypothetical protein Tax=Rudanella lutea RepID=UPI000362E69F
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
Ig9238_scaffold_47516_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14265..15575)
DNA (1311bp) protein (437aa)
Integral membrane sensor signal transduction histidine kinase Tax=Methylomonas methanica (strain MC09) RepID=G0A5E1_METMM
integral membrane sensor signal transduction histidine kinase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig9238_scaffold_47516_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15572..16288)
DNA (717bp) protein (239aa)
Two component transcriptional regulator, winged helix family Tax=Methylomonas methanica (strain MC09) RepID=G0A5E0_METMM
winged helix family two component transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig9238_scaffold_47516_14
unknown

Not on your lists

16411..16776
DNA (366bp) protein (122aa)

This feature has no annotations

Ig9238_scaffold_47516_15
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16942..17232
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AA55_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
Ig9238_scaffold_47516_16
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17485..18240
DNA (756bp) protein (252aa)
30S ribosomal protein S2 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=RS2_METFK
30S ribosomal protein S2
Tax=BJP_S1_SUB10_Methylophilales_55_32
Ig9238_scaffold_47516_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18321..19199
DNA (879bp) protein (293aa)
Elongation factor Ts Tax=Sulfuricella denitrificans skB26 RepID=S6AA92_9PROT
tsf; elongation factor Ts
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Ig9238_scaffold_47516_18
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19220..19954
DNA (735bp) protein (245aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
Uridylate kinase Tax=Methylovorus RepID=C6XDM9_METSD
pyrH; uridylate kinase
Ig9238_scaffold_47516_19
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19969..20535
DNA (567bp) protein (189aa)
Ribosome-recycling factor Tax=Ralstonia sp. AU12-08 RepID=S9RWW5_9RALS
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000255|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000255|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000255|HAMAP-Rule:MF_00040}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
Ig9238_scaffold_47516_20
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20565..21332
DNA (768bp) protein (256aa)
uppS; undecaprenyl pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
Isoprenyl transferase Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZH1_AROAE
Ig9238_scaffold_47516_21
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21353..22186
DNA (834bp) protein (278aa)
cdsA; putative phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938, ECO:0000313|EMBL:CAL94521.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Phosphatidate cytidylyltransferase Tax=Azoarcus sp. (strain BH72) RepID=A1K6R6_AZOSB
Ig9238_scaffold_47516_22
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22223..23425
DNA (1203bp) protein (401aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Thauera RepID=C4ZPR6_THASP
Ig9238_scaffold_47516_23
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23446..24843
DNA (1398bp) protein (466aa)
Peptidase M50 membrane-associated zinc metallopeptidase Tax=Sulfuricella denitrificans skB26 RepID=S6AL98_9PROT
peptidase M50 membrane-associated zinc metallopeptidase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Ig9238_scaffold_47516_24
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24923..27145
DNA (2223bp) protein (741aa)
Outer membrane protein assembly factor BamA Tax=Sulfuricella denitrificans skB26 RepID=S6ACC0_9PROT
surface antigen (D15)
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Ig9238_scaffold_47516_25
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27166..27660
DNA (495bp) protein (165aa)
Outer membrane protein Tax=Sulfuricella denitrificans skB26 RepID=S6B4A0_9PROT
Membrane protein {ECO:0000313|EMBL:GAO35735.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ompH; outer membrane protein
Ig9238_scaffold_47516_26
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27677..28741
DNA (1065bp) protein (355aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
UDP-3-O-acylglucosamine N-acyltransferase Tax=Sulfuricella denitrificans skB26 RepID=S6AH56_9PROT
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
Ig9238_scaffold_47516_27
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28722..29168
DNA (447bp) protein (149aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Tax=Thauera terpenica 58Eu RepID=T0AM18_9RHOO
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase
Ig9238_scaffold_47516_28
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29182..29958
DNA (777bp) protein (259aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (UDP-N-acetylglucosamine acyltransferase) Tax=mine drainage metagenome RepID=E6QQK7_9ZZZZ
Tax=CG_Hydro_01
Ig9238_scaffold_47516_29
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29974..31179
DNA (1206bp) protein (402aa)
lipid-A-disaccharide synthase (EC:2.4.1.182)
hypothetical protein Tax=Chitiniphilus shinanonensis RepID=UPI0003659B1A
Tax=RBG_16_Betaproteobacteria_58_11_curated
Ig9238_scaffold_47516_30
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31124..31741
DNA (618bp) protein (206aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
Ribonuclease HII Tax=Laribacter hongkongensis (strain HLHK9) RepID=RNH2_LARHH
Displaying items 1-30 of 38 in total

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