ggKbase home page

Ig9238_scaffold_14454

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_14454_1
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..304)
DNA (303bp) protein (101aa)
IS4 family transposase Tax=Proteobacteria RepID=J9RV93_BURCE
IS4 family transposase {ECO:0000313|EMBL:AFR44263.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
transposase, IS4 family protein
Ig9238_scaffold_14454_2
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

653..1060
DNA (408bp) protein (136aa)
XRE family transcriptional regulator Tax=Arenimonas oryziterrae RepID=UPI0003B718E7
XRE family transcriptional regulator
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_14454_3
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1438..1647
DNA (210bp) protein (70aa)
hypothetical protein Tax=Hymenobacter norwichensis RepID=UPI0003B74799
Uncharacterized protein {ECO:0000313|EMBL:EAQ77541.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
Ig9238_scaffold_14454_4
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1860..2576
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Polaromonas sp. CF318 RepID=J3D0J9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL82036.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
Membrane metalloprotease
Ig9238_scaffold_14454_5
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2592..3515
DNA (924bp) protein (308aa)
Uncharacterized protein Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KFG6_PSEF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY91185.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
Ig9238_scaffold_14454_6
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3583..3891)
DNA (309bp) protein (103aa)
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_14454_7
unknown

Not on your lists

comp(3979..4074)
DNA (96bp) protein (32aa)

This feature has no annotations

Ig9238_scaffold_14454_8
unknown

Not on your lists

comp(4165..4554)
DNA (390bp) protein (130aa)

This feature has no annotations

Ig9238_scaffold_14454_9
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4551..5114)
DNA (564bp) protein (188aa)
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_14454_10
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5618..6679)
DNA (1062bp) protein (354aa)
hypothetical protein Tax=Nevskia ramosa RepID=UPI0003B46138
Uncharacterized protein {ECO:0000313|EMBL:KFL35690.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
TIR-like domain-containing protein (DUF1863)
Ig9238_scaffold_14454_11
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7027..10836)
DNA (3810bp) protein (1270aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN52025.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
pathogenicity protein bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas sacchari genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
pathogenicity protein
Ig9238_scaffold_14454_12
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10833..12635)
DNA (1803bp) protein (601aa)
Surface antigen (D15) bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
surface antigen (D15)
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_14454_13
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12745..14925)
DNA (2181bp) protein (727aa)
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycyl-tRNA synthetase, beta subunit Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WX88_PSEUU
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_14454_14
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14925..15836)
DNA (912bp) protein (304aa)
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
Ig9238_scaffold_14454_15
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15959..16882
DNA (924bp) protein (308aa)
id=2693738 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_14454_16
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17277..21593
DNA (4317bp) protein (1439aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036EEFFE
Rhs family protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
Displaying 16 items

View Taxonomy