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Ig9238_scaffold_66494

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Displaying items 1-30 of 66 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_66494_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..141
DNA (141bp) protein (47aa)
Hypothetical membrane protein Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9AE88_BURM1
Membrane protein {ECO:0000313|EMBL:KGG93058.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical membrane protein
Ig9238_scaffold_66494_2
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138..602
DNA (465bp) protein (155aa)
glycoside hydrolase family protein (EC:3.2.1.17)
Lysozyme Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82S29_NITEU
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_66494_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(605..3760)
DNA (3156bp) protein (1052aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL).;"
UvrD/REP helicase Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8TVJ6_SULAD
UvrD/REP helicase
Ig9238_scaffold_66494_4
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3773..4246)
DNA (474bp) protein (158aa)
DNA mismatch endonuclease Vsr Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9ADY1_BURM1
DNA mismatch endonuclease Vsr family protein {ECO:0000313|EMBL:KIN90797.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
DNA mismatch endonuclease Vsr
Ig9238_scaffold_66494_5
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4350..4571
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=Pandoraea pnomenusa 3kgm RepID=V5PLS4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KIN90525.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
hypothetical protein
Ig9238_scaffold_66494_6
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4593..5639
DNA (1047bp) protein (349aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417, ECO:0000313|EMBL:KIN90495.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI00036CF6D9
dcm; DNA-cytosine methyltransferase
Ig9238_scaffold_66494_7
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5650..6876
DNA (1227bp) protein (409aa)
UPI0003CDE6F6 related cluster Tax=unknown RepID=UPI0003CDE6F6
Putative thymidine phosphorylase-like protein {ECO:0000313|EMBL:KIN90505.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
thymidine phosphorylase
Ig9238_scaffold_66494_8
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6869..7132
DNA (264bp) protein (88aa)
UPI0003CF544D related cluster Tax=unknown RepID=UPI0003CF544D
Kinase domain protein {ECO:0000313|EMBL:KIN90732.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
hypothetical protein
Ig9238_scaffold_66494_9
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7491..7703)
DNA (213bp) protein (71aa)
Putative uncharacterized protein Tax=Acidithiobacillus RepID=B7J9L7_ACIF2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACH83379.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
Ig9238_scaffold_66494_10
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8007..8267
DNA (261bp) protein (87aa)
Transcriptional regulator, HipB-like protein Tax=mine drainage metagenome RepID=T1CW25_9ZZZZ
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_66494_11
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8257..9552
DNA (1296bp) protein (432aa)
toxin HipA Tax=Methyloversatilis universalis RepID=UPI000374A093
hipA; HipA protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_66494_12
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10231..10350
DNA (120bp) protein (40aa)
Uncharacterized protein Tax=gamma proteobacterium HdN1 RepID=E1VM41_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45883.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Ig9238_scaffold_66494_13
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10347..10496
DNA (150bp) protein (50aa)
Uncharacterized protein Tax=gamma proteobacterium HdN1 RepID=E1VM41_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45883.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Ig9238_scaffold_66494_14
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10493..10996
DNA (504bp) protein (168aa)
N-acetyltransferase GCN5 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CBL45882.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Ig9238_scaffold_66494_15
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11012..11443)
DNA (432bp) protein (144aa)
LacI family regulatory protein Tax=Ralstonia sp. PBA RepID=I9KWA0_9RALS
LacI family regulatory protein {ECO:0000313|EMBL:EIZ04580.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
LacI family regulatory protein
Ig9238_scaffold_66494_16
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11440..11571)
DNA (132bp) protein (44aa)
Transcriptional regulator Tax=Ralstonia sp. PBA RepID=I9BXU3_9RALS
Transcriptional regulator {ECO:0000313|EMBL:EIZ04506.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
Ig9238_scaffold_66494_17
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11568..12704)
DNA (1137bp) protein (379aa)
Uncharacterized protein Tax=Ralstonia sp. PBA RepID=I9KW32_9RALS
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
Ig9238_scaffold_66494_18

Not on your lists

comp(12886..14595)
DNA (1710bp) protein (570aa)
Nitric-oxide reductase subunit B (EC:1.7.2.5)
Nitric-oxide reductase subunit B Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTZ6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN86107.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Ig9238_scaffold_66494_19
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14592..15566)
DNA (975bp) protein (325aa)
Nitric-oxide reductase subunit C Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTZ7_9GAMM
Cytochrome C {ECO:0000313|EMBL:EXL07936.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
cytochrome c2
Ig9238_scaffold_66494_20
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15563..15838)
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Rhodanobacter denitrificans RepID=I4WYM9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EZQ15020.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
Ig9238_scaffold_66494_21

Not on your lists

comp(16207..16482)
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6PQM7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH97232.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Ig9238_scaffold_66494_22

Not on your lists

16622..17059
DNA (438bp) protein (146aa)
Putative Transcriptional regulator Tax=mine drainage metagenome RepID=E6PQM9_9ZZZZ
Putative Transcriptional regulator {ECO:0000313|EMBL:CBH97234.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
BadM/Rrf2 family transcriptional regulator
Ig9238_scaffold_66494_23
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17532..17978
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Xanthomonas campestris pv. translucens RepID=L0T1D8_XANCT
cell wall hydrolase SleB
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_66494_24
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18162..19313)
DNA (1152bp) protein (384aa)
methylcitrate synthase (EC:2.3.3.5)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Citrate synthase bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Ig9238_scaffold_66494_25
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19574..20458)
DNA (885bp) protein (295aa)
prpB; 2-methylisocitrate lyase (EC:4.1.3.30)
2-methylisocitrate lyase Tax=Dyella japonica RepID=UPI000302D07B
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_66494_26
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20596..22494)
DNA (1899bp) protein (633aa)
Propionyl-CoA synthetase {ECO:0000313|EMBL:AKC85983.1}; EC=6.2.1.17 {ECO:0000313|EMBL:AKC85983.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
acetyl-CoA synthetase Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030247A2
propionate/CoA ligase
Ig9238_scaffold_66494_27
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22614..24086)
DNA (1473bp) protein (491aa)
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Mercuric reductase MerA Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BD8_POLSJ
putative mercuric reductase
Ig9238_scaffold_66494_28
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24096..24521)
DNA (426bp) protein (142aa)
Putative mercury transport protein MerC Tax=Burkholderia sp. TJI49 RepID=F0FY39_9BURK
mercury transport protein MerC
Putative mercury transport protein MerC {ECO:0000313|EMBL:EGD05860.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
Ig9238_scaffold_66494_29
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24589..25017
DNA (429bp) protein (143aa)
Putative transcriptional regulator MerR Tax=Acidovorax sp. NO-1 RepID=H0BZS6_9BURK
MerR family transcriptional regulator {ECO:0000313|EMBL:KAK45335.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
merR; Hg(II)-responsive transcriptional regulator
Ig9238_scaffold_66494_30
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25238..26224)
DNA (987bp) protein (329aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
malate dehydrogenase Tax=Arenimonas oryziterrae RepID=UPI0003B5E7A1
malate dehydrogenase
Displaying items 1-30 of 66 in total

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