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Ig9238_scaffold_161749

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Displaying items 1-30 of 97 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_161749_1
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(320..709)
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T0YYJ1_9ZZZZ
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_161749_2
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1089..2501)
DNA (1413bp) protein (471aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
histidine kinase Tax=Xanthomonas sacchari RepID=UPI0002630370
signal transduction histidine kinase
Ig9238_scaffold_161749_3
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2498..3175)
DNA (678bp) protein (226aa)
Transcriptional regulator Tax=Pseudomonas sp. EGD-AK9 RepID=U2A209_9PSED
Transcriptional regulator {ECO:0000313|EMBL:ERI53940.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.;"
DNA-binding response regulator
Ig9238_scaffold_161749_4
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3242..3748)
DNA (507bp) protein (169aa)
Nuclear protein SET bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_161749_5
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3840..4937
DNA (1098bp) protein (366aa)
Kelch motif domain-containing protein Tax=Alteromonas macleodii str. 'English Channel 615' RepID=S5AI81_ALTMA
kelch motif domain-containing protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_161749_trna_2
unknown

Not on your lists

comp(5012..5098)
DNA (87bp)
transferRNA Ser
Ig9238_scaffold_161749_6
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5167..6126)
DNA (960bp) protein (320aa)
LysR family transcriptional regulator Tax=Stenotrophomonas maltophilia RepID=UPI00036829BE
LysR family transcriptional regulator
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_161749_7
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6279..7559)
DNA (1281bp) protein (427aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Serine--tRNA ligase bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
seryl-tRNA synthetase
Ig9238_scaffold_161749_8
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7805..8194)
DNA (390bp) protein (130aa)
Putative fluoride ion transporter CrcB Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=CRCB_SACD2
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
CrcB protein
Ig9238_scaffold_161749_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8191..9579)
DNA (1389bp) protein (463aa)
ATPase AAA Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EDB08C
Recombination factor protein RarA {ECO:0000313|EMBL:AKC88024.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
ATPase AAA
Ig9238_scaffold_161749_10
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9800..10459)
DNA (660bp) protein (220aa)
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
Outer-membrane lipoprotein carrier protein bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas campestris genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
membrane protein
Ig9238_scaffold_161749_11
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10720..11481
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Xanthomonas axonopodis pv. malvacearum str. GSPB2388 RepID=K8FTY6_9XANT
Protein of unknown function (DUF2884)
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_161749_12
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(11625..12569)
DNA (945bp) protein (315aa)
BsuBI/PstI restriction endonuclease Tax=Cardiobacterium valvarum F0432 RepID=G9ZIN4_9GAMM
restriction endonuclease BsuBI
Tax=CG_Proteo_01
Ig9238_scaffold_161749_13
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12566..14038)
DNA (1473bp) protein (491aa)
Modification methylase BsuBI/PstI (EC:2.1.1.72)
SAM-dependent methlyltransferase Tax=Pantoea sp. A4 RepID=UPI00035C3EE9
SAM-dependent methlyltransferase {ECO:0000313|EMBL:KGM57478.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
Ig9238_scaffold_161749_14
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14351..16678)
DNA (2328bp) protein (776aa)
cell division protein FtsK Tax=Arenimonas oryziterrae RepID=UPI0003B77B2B
Cell division protein FtsK {ECO:0000313|EMBL:KFN50020.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
cell division protein FtsK
Ig9238_scaffold_161749_15
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16983..17939
DNA (957bp) protein (319aa)
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=GWF1_Xanthomonadales_69_6_curated
Ig9238_scaffold_161749_16
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18126..18593
DNA (468bp) protein (156aa)
Rrf2 family transcriptional regulator Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00037A9A52
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:KGM54501.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
BadM/Rrf2 family transcriptional regulator
Ig9238_scaffold_161749_17
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18599..20038
DNA (1440bp) protein (480aa)
UPF0051 protein Tax=Xanthomonas campestris pv. translucens RepID=L0SXC9_XANCT
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:EYR67165.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
cysteine desulfurase
Ig9238_scaffold_161749_18
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20179..20943
DNA (765bp) protein (255aa)
transporter Tax=Arenimonas oryziterrae RepID=UPI0003B6D0F6
Transporter {ECO:0000313|EMBL:KFN45672.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
sufC; iron ABC transporter ATP-binding protein
Ig9238_scaffold_161749_19
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21038..22339
DNA (1302bp) protein (434aa)
ABC transporter permease Tax=Arenimonas oryziterrae RepID=UPI0003B4624F
ABC transporter permease {ECO:0000313|EMBL:KGM54505.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
iron ABC transporter permease
Ig9238_scaffold_161749_20
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22336..23607
DNA (1272bp) protein (424aa)
cysteine desulfurase Tax=Stenotrophomonas maltophilia RepID=UPI0002EDB5EE
Cysteine sulfinate desulfinase {ECO:0000313|EMBL:AKC78930.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
iscS; cysteine desulfurase
Ig9238_scaffold_161749_21

Not on your lists

23877..24713
DNA (837bp) protein (279aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1C3A6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD79961.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Ig9238_scaffold_161749_22

Not on your lists

24713..25555
DNA (843bp) protein (281aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6PP64_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH96716.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Ig9238_scaffold_161749_23

Not on your lists

25585..25839
DNA (255bp) protein (85aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T1BN67_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD55425.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Ig9238_scaffold_161749_24

Not on your lists

25907..26191
DNA (285bp) protein (95aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T1BN67_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD55425.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Ig9238_scaffold_161749_25
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26236..27333)
DNA (1098bp) protein (366aa)
Glutathione S-transferase Tax=Glaciecola arctica BSs20135 RepID=K6Z9U6_9ALTE
Glutathione S-transferase {ECO:0000313|EMBL:GAC20220.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola arctica BSs20135.;"
glutathione S-transferase
Ig9238_scaffold_161749_26
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27462..27992
DNA (531bp) protein (177aa)
GCN5-related N-acetyltransferase Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WRZ6_PSEUU
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADV26945.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
Ig9238_scaffold_161749_27
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28147..28464
DNA (318bp) protein (106aa)
Benzene 1,2-dioxygenase {ECO:0000313|EMBL:KGM51045.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
Rieske (2Fe-2S) iron-sulfur domain bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
benzene 1,2-dioxygenase
Ig9238_scaffold_161749_28
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28546..29175)
DNA (630bp) protein (210aa)
hypothetical protein Tax=Xanthomonas sp. M97 RepID=UPI00039FEF66
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_161749_29
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29306..29596)
DNA (291bp) protein (97aa)
DNA transport competence protein Tax=Arenimonas oryziterrae RepID=UPI0003B4F772
competence protein ComEA helix-hairpin-helix repeat-containing protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Displaying items 1-30 of 97 in total

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