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Ig9238_scaffold_231584

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Displaying items 1-30 of 166 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_231584_1
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..304)
DNA (303bp) protein (101aa)
IS4 family transposase Tax=Proteobacteria RepID=J9RV93_BURCE
IS4 family transposase {ECO:0000313|EMBL:AFR44263.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
transposase, IS4 family protein
Ig9238_scaffold_231584_2
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

593..856
DNA (264bp) protein (88aa)
Transposase Tax=Nitrococcus mobilis Nb-231 RepID=A4BVG8_9GAMM
Transposase {ECO:0000313|EMBL:EAR22742.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein
Ig9238_scaffold_231584_3
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1808..3352)
DNA (1545bp) protein (515aa)
hypothetical protein Tax=Methylohalobius crimeensis RepID=UPI0003B761F2
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_231584_4
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3425..9496)
DNA (6072bp) protein (2024aa)
YD repeat protein Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DJP4_9GAMM
wapA_[H]; YD repeat protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_231584_5
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10182..11219
DNA (1038bp) protein (346aa)
hypothetical protein Tax=Bordetella sp. FB-8 RepID=UPI0003775FF8
isxo7 transposase
Isxo7 transposase {ECO:0000313|EMBL:BAP89485.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
Ig9238_scaffold_231584_6
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11300..11533)
DNA (234bp) protein (78aa)
addiction module antitoxin RelB Tax=Methylovulum miyakonense RepID=UPI000368047F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE24478.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
Ig9238_scaffold_231584_7
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11562..12518)
DNA (957bp) protein (319aa)
K+dependent Na+ exchanger related-protein Tax=Beggiatoa alba B18LD RepID=I3CJ06_9GAMM
CaCA family Na(+)/Ca(+) antiporter
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_231584_8
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12610..13914)
DNA (1305bp) protein (435aa)
Homogentisate 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015626}; Short=HGDO {ECO:0000256|HAMAP-Rule:MF_00334};; EC=1.13.11.5 {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015614};; Homogentisate oxygenase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisic acid oxidase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisicase {ECO:0000256|HAMAP-Rule:MF_00334}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
hmgA; homogentisate 1,2-dioxygenase (EC:1.13.11.5)
Homogentisate 1,2-dioxygenase bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Ig9238_scaffold_231584_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14023..15120)
DNA (1098bp) protein (366aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase Tax=Arenimonas oryziterrae RepID=UPI0003B5B567
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:KGI78464.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Ig9238_scaffold_231584_10
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15214..15696
DNA (483bp) protein (161aa)
MarR family transcriptional regulator Tax=Arenimonas oryziterrae RepID=UPI0003B33CDD
Uncharacterized protein {ECO:0000313|EMBL:KFL37084.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
MarR family transcriptional regulator
Ig9238_scaffold_231584_11
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15771..17024
DNA (1254bp) protein (418aa)
Threonine synthase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA35_SINAD
threonine synthase
Tax=BJP_08E140C01_Xanthomonadales_64_42
Ig9238_scaffold_231584_12
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17108..18625)
DNA (1518bp) protein (506aa)
Amino acid/peptide transporter Tax=Rhodanobacter fulvus Jip2 RepID=I4VWK2_9GAMM
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:KFN41910.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
dihydroorotate dehydrogenase
Ig9238_scaffold_231584_13
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18802..19653)
DNA (852bp) protein (284aa)
Tryptophan 23-dioxygenase bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
tryptophan 2,3-dioxygenase
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_231584_14
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19823..23575
DNA (3753bp) protein (1251aa)
extracellular nuclease bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas sacchari genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
nuclease
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_231584_15
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23695..24786
DNA (1092bp) protein (364aa)
ABC transporter permease Tax=Arenimonas oryziterrae RepID=UPI0003B3B080
pyruvate dehydrogenase E1 alpha subunit
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Ig9238_scaffold_231584_16
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24940..25917
DNA (978bp) protein (326aa)
2-oxoisovalerate dehydrogenase subunit beta {ECO:0000313|EMBL:KFL37091.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
Transketolase central region bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
2-oxoisovalerate dehydrogenase
Ig9238_scaffold_231584_17
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26046..27446
DNA (1401bp) protein (467aa)
Branched-chain alpha-keto acid dehydrogenase subunit E2 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWU0_PSEUP
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EYR68450.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
branched-chain alpha-keto acid dehydrogenase subunit E2
Ig9238_scaffold_231584_18
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27536..28003)
DNA (468bp) protein (156aa)
Bacterioferritin bin=GWF1_Xanthomonadales_69_6 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
bacterioferritin
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Ig9238_scaffold_231584_19
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28128..28328)
DNA (201bp) protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL37224.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
Bacterioferritin-associated ferredoxin bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
bacterioferritin-associated ferredoxin
Ig9238_scaffold_231584_20
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28422..28976)
DNA (555bp) protein (185aa)
nudH; dinucleoside polyphosphate hydrolase (EC:3.6.1.-)
RNA pyrophosphohydrolase bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Ig9238_scaffold_231584_trna_1
unknown

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29141..29214
DNA (74bp)
transferRNA Met
Ig9238_scaffold_231584_21
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29419..29688)
DNA (270bp) protein (90aa)
Fic protein family Tax=Brevundimonas sp. BAL3 RepID=B4W814_9CAUL
Fic family protein {ECO:0000313|EMBL:GAM99785.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
filamentation induced by cAMP protein Fic
Ig9238_scaffold_231584_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29899..30333)
DNA (435bp) protein (145aa)
hypothetical protein Tax=Aquaspirillum serpens RepID=UPI0003B6C4B1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig9238_scaffold_231584_23
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(30330..30956)
DNA (627bp) protein (209aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AFF6
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Ig9238_scaffold_231584_24
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31163..31534)
DNA (372bp) protein (124aa)
Cupin 2 conserved barrel domain protein Tax=Variovorax paradoxus (strain EPS) RepID=E6VAJ6_VARPE
Cupin {ECO:0000313|EMBL:EYR66866.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Cupin 2 barrel domain-containing protein
Ig9238_scaffold_231584_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31584..33386)
DNA (1803bp) protein (601aa)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA helicase/exodeoxyribonuclease V, alpha subunit (EC:3.1.11.5)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI000349B341
Ig9238_scaffold_231584_26
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33619..37212)
DNA (3594bp) protein (1198aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI0003499AB8
ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing
Ig9238_scaffold_231584_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37209..40778)
DNA (3570bp) protein (1190aa)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA helicase/exodeoxyribonuclease V, gamma subunit (EC:3.1.11.5)
Exodeoxyribonuclease V subunit gamma Tax=Rhodanobacter spathiphylli B39 RepID=I4W7B2_9GAMM
Ig9238_scaffold_231584_28
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40854..41129)
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Cronobacter dublinensis 582 RepID=K8AZ98_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KKD57701.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
hypothetical protein
Ig9238_scaffold_231584_29
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41481..41876
DNA (396bp) protein (132aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037799E3
Phasin protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Displaying items 1-30 of 166 in total

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