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JGI24025J20009_10002668

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JGI24025J20009_10002668_1
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..1248
DNA (1248bp) protein (416aa)
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADQ13591.1}; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium hydrogen
JGI24025J20009_10002668_2
unknown

Not on your lists

1447..1659
DNA (213bp) protein (71aa)
JGI24025J20009_10002668_3
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1694..2314)
DNA (621bp) protein (207aa)
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Therma
JGI24025J20009_10002668_4
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2316..2687)
DNA (372bp) protein (124aa)
rpsK; 30S ribosomal protein S11
Tax=BJP_08E140C01_Clostridiales_46_19
JGI24025J20009_10002668_5
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists


comp(2831..3217)
DNA (387bp) protein (129aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Zixibacteria_43_9_curated
rpsM; 30S ribosomal protein S13
JGI24025J20009_10002668_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(3383..3496)
DNA (114bp) protein (38aa)
rpmJ; Ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
rpmJ; 50S ribosomal protein L36
JGI24025J20009_10002668_7
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(3705..3923)
DNA (219bp) protein (73aa)
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFOXYC12_FULL_TA06_54_24_curated
translation initiation factor IF-1
JGI24025J20009_10002668_8
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(4014..4646)
DNA (633bp) protein (211aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RBG_16_KB1_OP1_55_9_curated
adk; adenylate kinase
JGI24025J20009_10002668_9
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


comp(4646..5959)
DNA (1314bp) protein (438aa)
secY; preprotein translocase subunit SecY Tax=RIFOXYC12_FULL_TA06_54_24_curated
secY; preprotein translocase subunit SecY
JGI24025J20009_10002668_10
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(5982..6410)
DNA (429bp) protein (143aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1472719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source=
rplO; 50S ribosomal protein L15
JGI24025J20009_10002668_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6420..6602)
DNA (183bp) protein (61aa)
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000255|HAMAP-Rule:MF_01371}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="
JGI24025J20009_10002668_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6638..7111)
DNA (474bp) protein (158aa)
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Deltaproteobacteria_54_11_curated
30S ribosomal protein S5
JGI24025J20009_10002668_13
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists


comp(7352..7690)
DNA (339bp) protein (113aa)
rplR; 50S ribosomal protein L18
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=Caldatribacterium californiense
JGI24025J20009_10002668_14
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists


comp(7706..8254)
DNA (549bp) protein (183aa)
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
rplF; 50S ribosomal protein L6
JGI24025J20009_10002668_15
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8418..8798)
DNA (381bp) protein (127aa)
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.
JGI24025J20009_10002668_16
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists


comp(8805..8990)
DNA (186bp) protein (62aa)
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=CG_Omnitr_02
rpsN; 30S ribosomal protein S14
JGI24025J20009_10002668_17
unknown

Not on your lists

comp(8959..9060)
DNA (102bp) protein (34aa)

This feature has no annotations

JGI24025J20009_10002668_18
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(9008..9571)
DNA (564bp) protein (188aa)
Ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
JGI24025J20009_10002668_19
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


comp(9876..10184)
DNA (309bp) protein (103aa)
ribosomal protein L24
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
JGI24025J20009_10002668_20
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10187..10555)
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
50S ribosomal protein L14
JGI24025J20009_10002668_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10552..10785)
DNA (234bp) protein (78aa)
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
30S ribosomal protein S17
JGI24025J20009_10002668_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10833..11033)
DNA (201bp) protein (67aa)
JGI24025J20009_10002668_23
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11020..11448)
DNA (429bp) protein (143aa)
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000255|HAMAP-Rule:MF_01342}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldan
JGI24025J20009_10002668_24
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists


comp(11713..12342)
DNA (630bp) protein (210aa)
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_13_Actinobacteria_55_18_curated
30S ribosomal protein S3
Displaying 24 items

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