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JGI24025J20009_10000708

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JGI24025J20009_10000708_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..178)
DNA (177bp) protein (59aa)

This feature has no annotations

JGI24025J20009_10000708_2

Not on your lists

comp(373..1014)
DNA (642bp) protein (214aa)
Peroxiredoxin {ECO:0000256|HAMAP-Rule:MF_00401}; EC=1.11.1.15 {ECO:0000256|HAMAP-Rule:MF_00401};; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Peroxiredoxin (EC:1.11.1.15)
JGI24025J20009_10000708_3
Eikenella corrodens, Eikenella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1205..2131)
DNA (927bp) protein (309aa)
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiqui
JGI24025J20009_10000708_4
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


comp(2156..4588)
DNA (2433bp) protein (811aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribact
DNA gyrase subunit A
JGI24025J20009_10000708_5
Cytophaga aurantiaca, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4713..6389
DNA (1677bp) protein (559aa)

This feature has no annotations

JGI24025J20009_10000708_6
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6408..7370
DNA (963bp) protein (321aa)
JGI24025J20009_10000708_7
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

7677..8888
DNA (1212bp) protein (404aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFOXYC12_FULL_TA06_54_24_curated
DNA polymerase III subunit gamma/tau (EC:2.7.7.7)
JGI24025J20009_10000708_8
RBG_13_WOR_3_43_14_curated, WOR-3, Bacteria

Not on your lists

8872..9189
DNA (318bp) protein (106aa)
hypothetical protein; K09747 hypothetical protein Tax=RBG_13_WOR_3_43_14_curated
hypothetical protein
JGI24025J20009_10000708_9
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9173..9781
DNA (609bp) protein (203aa)
recR; recombination protein RecR; K06187 recombination protein RecR Tax=CG_Solirubrobact_01
recombinase RecR
JGI24025J20009_10000708_10
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

9841..10152
DNA (312bp) protein (104aa)
sigma 54 modulation protein/30S ribosomal protein S30EA; K05808 putative sigma-54 modulation protein Tax=RBG_16_Zixibacteria_53_22_curated
putative sigma-54 modulation protein
JGI24025J20009_10000708_11

Not on your lists

10153..11145
DNA (993bp) protein (331aa)
Marine sediment metagenome DNA, contig: S12H4_C02143 {ECO:0000313|EMBL:GAI68057.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Hpr(Ser) kinase/phosphatase
JGI24025J20009_10000708_12
RBG_13_WOR_3_43_14_curated, WOR-3, Bacteria

Not on your lists

11132..11542
DNA (411bp) protein (137aa)
PTS system fructose subfamily transporter subunit IIA; K02793 PTS system, mannose-specific IIA component [EC:2.7.1.69] Tax=RBG_13_WOR_3_43_14_curated
JGI24025J20009_10000708_13
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(11539..14379)
DNA (2841bp) protein (947aa)
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Caldithrix_48_16_curated
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
JGI24025J20009_10000708_14
unknown

Not on your lists

comp(14435..14929)
DNA (495bp) protein (165aa)

This feature has no annotations

JGI24025J20009_10000708_15
unknown

Not on your lists

15031..15104
DNA (74bp)
JGI24025J20009_10000708_16
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15170..16810)
DNA (1641bp) protein (547aa)
acyl-CoA synthetase yngI
Tax=BJP_08E140C01_Syntrophobacterales_43_19
JGI24025J20009_10000708_17
unknown

Not on your lists

16900..17040
DNA (141bp) protein (47aa)

This feature has no annotations

JGI24025J20009_10000708_18
Staphylothermus hellenicus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(17037..18044)
DNA (1008bp) protein (336aa)
hydrolase (metallo-beta-lactamase superfamily)-like protein
UPF0282 protein Shell_0586 {ECO:0000256|HAMAP-Rule:MF_01406}; TaxID=591019 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylother
JGI24025J20009_10000708_19
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(18041..18853)
DNA (813bp) protein (271aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RBG_13_Chloroflexi_46_9_curated
phosphatidate cytidylyltransferase
JGI24025J20009_10000708_20
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(18850..19500)
DNA (651bp) protein (217aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
JGI24025J20009_10000708_21
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19534..20091)
DNA (558bp) protein (186aa)
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=483547 species="Bacteria;
JGI24025J20009_10000708_22
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(20085..20771)
DNA (687bp) protein (229aa)
uridylate kinase
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
JGI24025J20009_10000708_23
RBG_13_WOR_3_43_14_curated, WOR-3, Bacteria

Not on your lists

comp(20764..21357)
DNA (594bp) protein (198aa)
translation elongation factor Ts; K02357 elongation factor Ts Tax=RBG_13_WOR_3_43_14_curated
tsf; elongation factor Ts
JGI24025J20009_10000708_24
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(21354..22067)
DNA (714bp) protein (238aa)
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000255|HAMAP-Rule:MF_00291}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldana
JGI24025J20009_10000708_25
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists


comp(22052..22441)
DNA (390bp) protein (130aa)
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
30S ribosomal protein S9
JGI24025J20009_10000708_26
Thermotoga sp. Mc24, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


comp(22438..22866)
DNA (429bp) protein (143aa)
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1231241 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotog
JGI24025J20009_10000708_27
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(22973..24958)
DNA (1986bp) protein (662aa)
Helicase {ECO:0000313|EMBL:KJU83809.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
putative ATP-dependent helicase
JGI24025J20009_10000708_28
RBG_13_WOR_3_43_14_curated, WOR-3, Bacteria

Not on your lists

comp(24921..25292)
DNA (372bp) protein (124aa)
hypothetical protein Tax=RBG_13_WOR_3_43_14_curated
Verrucomicrobia/Planctomycetes-restricted protein
JGI24025J20009_10000708_29
unknown

Not on your lists

comp(25356..25910)
DNA (555bp) protein (185aa)
Displaying 29 items

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