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JSantini_Fe4_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 131 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe4_scaffold_32_1
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

259..936
DNA (678bp) protein (226aa)
TPR domain/sulfotransferase domain-containing protein
TPR domain/sulfotransferase domain protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XR62_9GAMM
TPR domain/sulfotransferase domain protein {ECO:0000313|EMBL:EGQ62205.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe4_scaffold_32_2
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

958..1458
DNA (501bp) protein (167aa)
hypothetical protein
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625225
Putative uncharacterized protein {ECO:0000313|EMBL:AEM49078.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_32_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1516..2424)
DNA (909bp) protein (303aa)
integrase family protein
Integrase family protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JUB4_9GAMM
Integrase family protein {ECO:0000313|EMBL:AEM49083.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_32_4
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2618..2965
DNA (348bp) protein (116aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JUB5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM49084.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_32_5
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2994..3497
DNA (504bp) protein (168aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JUB6_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM49085.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_32_6
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3515..3994
DNA (480bp) protein (160aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XX65_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ64308.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe4_scaffold_32_7
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4007..4561
DNA (555bp) protein (185aa)
peptidase M50
Peptidase M50 n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JUA3_9GAMM
Peptidase M50 {ECO:0000313|EMBL:CDQ11771.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_32_8
unknown

Not on your lists

comp(4605..4754)
DNA (150bp) protein (50aa)

This feature has no annotations

JSantini_Fe4_scaffold_32_9
unknown

Not on your lists

comp(4798..5130)
DNA (333bp) protein (111aa)

This feature has no annotations

JSantini_Fe4_scaffold_32_10
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5259..5624)
DNA (366bp) protein (122aa)
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QB30_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDQ09170.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_32_11
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5703..6899)
DNA (1197bp) protein (399aa)
tnpA; transposase
Putative transposase n=1 Tax=Leptospirillum ferriphilum (strain ML-04) RepID=J9Z9Q5_LEPFM
Putative transposase {ECO:0000313|EMBL:AFS52876.1}; TaxID=1048260 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum (strain ML-04).;"
JSantini_Fe4_scaffold_32_12
Acetobacter cibinongensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6925..8637)
DNA (1713bp) protein (571aa)
AlwI restriction endonuclease
type IIs restriction endonuclease, partial n=1 Tax=Paracoccus sp. TRP RepID=UPI000225EF59
Type IIs restriction endonuclease {ECO:0000313|EMBL:GAN60578.1}; TaxID=1231339 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter cibinongensis 4H-1.;"
JSantini_Fe4_scaffold_32_13
unknown

Not on your lists

comp(8634..8837)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225EF5A
JSantini_Fe4_scaffold_32_14
Acetobacter cibinongensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8849..10765)
DNA (1917bp) protein (639aa)
DNA adenine methylase
DNA adenine methylase n=4 Tax=Acinetobacter baumannii RepID=K1KZ26_ACIBA
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1231339 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter cibinongensis 4H-1.;"
JSantini_Fe4_scaffold_32_15

Not on your lists

comp(10947..11219)
DNA (273bp) protein (91aa)
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QB30_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI04406.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_32_16
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11266..11898)
DNA (633bp) protein (211aa)
hypothetical protein
Putative uncharacterized protein (Fragment) n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XMC1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ60864.1}; Flags: Fragment;; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe4_scaffold_32_17
unknown

Not on your lists

comp(11983..12333)
DNA (351bp) protein (117aa)

This feature has no annotations

JSantini_Fe4_scaffold_32_18
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12499..13173)
DNA (675bp) protein (225aa)
NERD domain-containing protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XX66_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ64309.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe4_scaffold_32_19
Halomonas sp. GFAJ-1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13184..13783)
DNA (600bp) protein (200aa)
Lipoprotein n=1 Tax=Halomonas sp. GFAJ-1 RepID=H0J2D7_9GAMM
Lipoprotein {ECO:0000313|EMBL:EHK60959.1}; TaxID=1118153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. GFAJ-1.;"
JSantini_Fe4_scaffold_32_20
unknown

Not on your lists

comp(13835..14605)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002625122
JSantini_Fe4_scaffold_32_21
unknown

Not on your lists

comp(14602..15327)
DNA (726bp) protein (242aa)

This feature has no annotations

JSantini_Fe4_scaffold_32_22
unknown

Not on your lists

comp(15311..15646)
DNA (336bp) protein (112aa)

This feature has no annotations

JSantini_Fe4_scaffold_32_23
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15633..16175)
DNA (543bp) protein (181aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XWB6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ64009.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe4_scaffold_32_24
unknown

Not on your lists

comp(16168..17640)
DNA (1473bp) protein (491aa)

This feature has no annotations

JSantini_Fe4_scaffold_32_25
unknown

Not on your lists

comp(17628..17891)
DNA (264bp) protein (88aa)

This feature has no annotations

JSantini_Fe4_scaffold_32_26
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17888..18403)
DNA (516bp) protein (172aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XWB5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGQ64008.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe4_scaffold_32_27
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18400..18672)
DNA (273bp) protein (91aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J3A2_CYCMS
Uncharacterized protein {ECO:0000313|EMBL:AEL24043.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
JSantini_Fe4_scaffold_32_28
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18666..19931)
DNA (1266bp) protein (422aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Ralstonia pickettii RepID=C6BQG5_RALP1
Uncharacterized protein {ECO:0000313|EMBL:ENZ77929.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii OR214.;"
JSantini_Fe4_scaffold_32_29
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19931..21202)
DNA (1272bp) protein (424aa)
hypothetical protein
Conserved domain protein, putative n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) RepID=B7J852_ACIF2
Conserved domain protein, putative {ECO:0000313|EMBL:ACK78025.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_32_30
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21205..22218)
DNA (1014bp) protein (338aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JUD6_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:AEM49105.1}; Flags: Precursor;; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
Displaying items 1-30 of 131 in total

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