name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
JSantini_Fe4_scaffold_63_31
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
41293..42117
|
winged helix family two component transcriptional regulator
Transcriptional regulator, putative n=3 Tax=root RepID=B7J9Q8_ACIF2
Putative two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACH84744.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
|
|
JSantini_Fe4_scaffold_63_32
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
42302..44635
|
TonB-dependent receptor
TonB-dependent receptor n=3 Tax=Acidithiobacillus RepID=B7J9Q9_ACIF2
TonB-dependent receptor {ECO:0000313|EMBL:ACK79569.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
|
|
JSantini_Fe4_scaffold_63_33
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
44831..47194
|
TonB-dependent receptor
TonB-dependent receptor n=3 Tax=Acidithiobacillus RepID=B5EPV1_ACIF5
TonB-dependent receptor {ECO:0000313|EMBL:ACH84746.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
|
|
JSantini_Fe4_scaffold_63_34
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(47411..47515)
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EPV4_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:ACH84749.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
|
|
JSantini_Fe4_scaffold_63_35
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(47766..50342)
|
cation transporting P-type ATPase
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=3 Tax=Acidithiobacillus RepID=B5EPV5_ACIF5
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:ACH84750.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
|
|
JSantini_Fe4_scaffold_63_36
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(50382..50807)
|
msrB; methionine-R-sulfoxide reductase (EC:1.8.4.-)
Peptide methionine sulfoxide reductase MsrB n=4 Tax=root RepID=B5EPV7_ACIF5
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
|
|
JSantini_Fe4_scaffold_63_37
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(50822..51409)
|
msrA; peptide-methionine (S)-S-oxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=3 Tax=Acidithiobacillus RepID=B5EPV8_ACIF5
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
|
|
JSantini_Fe4_scaffold_63_38 |
Not on your lists |
51560..52468
|
thiol:disulfide interchange protein DsbG
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q8K7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI03533.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
|
|
JSantini_Fe4_scaffold_63_39 |
Not on your lists |
52528..53184
|
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent n=1 Tax=mine drainage metagenome RepID=E6Q8K5_9ZZZZ
Nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent {ECO:0000313|EMBL:CBI03531.1}; EC=2.7.7.18 {ECO:0000313|EMBL:CBI03531.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
|
|
JSantini_Fe4_scaffold_63_40
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
53208..53564
|
iojap family protein
Ribosomal silencing factor RsfS n=4 Tax=root RepID=B5EPW1_ACIF5
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
|
|
JSantini_Fe4_scaffold_63_41
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
53571..54044
|
rRNA large subunit methyltransferase
Ribosomal RNA large subunit methyltransferase H n=3 Tax=Acidithiobacillus RepID=RLMH_ACIF2
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
|
|
JSantini_Fe4_scaffold_63_42
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
54052..54489
|
hypothetical protein
Lipoprotein, putative n=3 Tax=Acidithiobacillus RepID=B7J9S4_ACIF2
Uncharacterized protein {ECO:0000313|EMBL:ACH84758.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
|
|
JSantini_Fe4_scaffold_63_43
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
54486..55367
|
hypothetical protein
Putative uncharacterized protein n=3 Tax=Acidithiobacillus RepID=B5EPW4_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:ACH84759.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
|
|
JSantini_Fe4_scaffold_63_44
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
55364..55951
|
maf-1; maf protein
Maf-like protein Lferr_2566 n=4 Tax=Acidithiobacillus RepID=B5EPW5_ACIF5
Maf-like protein Lferr_2566 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
|
|
JSantini_Fe4_scaffold_63_45
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
55948..57438
|
Rne/Rng family ribonuclease
Ribonuclease, Rne/Rng family n=3 Tax=Acidithiobacillus RepID=B5EPW6_ACIF5
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:ACK79988.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
|
|
JSantini_Fe4_scaffold_63_46
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(57477..58727)
|
sigma-54 dependent DNA-binding response regulator
Two component, sigma54 specific, transcriptional regulator, Fis family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPW7_ACIF5
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACH84762.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
|
|
JSantini_Fe4_scaffold_63_47
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(58734..59045)
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EPW8_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:ACH84763.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
|
|
JSantini_Fe4_scaffold_63_48
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(59026..60573)
|
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPW9_ACIF5
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
|
|
JSantini_Fe4_scaffold_63_49
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(60719..60949)
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EPX0_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:ACH84765.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
|
|
JSantini_Fe4_scaffold_63_50
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(61241..61522)
|
hypothetical protein
Probable Fe(2+)-trafficking protein n=3 Tax=Acidithiobacillus RepID=FETP_ACIF2
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
|
|
JSantini_Fe4_scaffold_63_51
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
62230..62703
|
hypothetical protein
Uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NRJ8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AIA56601.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
|
|
JSantini_Fe4_scaffold_63_52
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(62983..63786)
|
aldolase
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H561_PSEAC
Aldolase {ECO:0000313|EMBL:KIA80604.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
|
|
JSantini_Fe4_scaffold_63_53
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(63755..64522)
|
hypothetical protein
Uncharacterized protein n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AG55_BURGB
Uncharacterized protein {ECO:0000313|EMBL:KIA80603.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
|
|
JSantini_Fe4_scaffold_63_54
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(64613..65281)
|
Tax=RBG_16_Gamma2_60_9_curated
|
|
JSantini_Fe4_scaffold_63_55
R_Gammaproteobacteria_38_11, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(65420..65773)
|
molybdopterin and thiamine biosynthesis dinucleotide-utilizing enzyme
Molybdopterin and thiamine biosynthesis dinucleotide-utilizing enzyme (Fragment) n=1 Tax=uncultured bacterium RepID=K2BLI5_9BACT
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_38_11_curated
|
|
JSantini_Fe4_scaffold_63_56
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(65828..65971)
|
ISAtc1-like protein
ISAtc1-like protein n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZL22_ACICS
ISAtc1-like protein {ECO:0000313|EMBL:AEK58122.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
|
Name | Ratio |
---|---|
Acidithiobacillus ferrooxidans | 58.93% |
mine drainage metagenome | 21.43% |
Acidithiobacillus sp. GGI-221 | 7.14% |
Chromobacterium piscinae | 3.57% |
Acidithiobacillus caldus | 3.57% |
unknown | 1.79% |
R_Gammaproteobacteria_38_11 | 1.79% |
RBG_16_Gamma2_60_9_curated | 1.79% |