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JSantini_Fe4_scaffold_157

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe4_scaffold_157_1
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..688)
DNA (687bp) protein (229aa)
heterodisulfide reductase subunit B
Heterodisulfide reductase subunit B, homolog n=4 Tax=root RepID=B7J7M1_ACIF2
Uncharacterized protein {ECO:0000313|EMBL:ACH84387.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_157_2

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comp(699..1385)
DNA (687bp) protein (229aa)
hypothetical protein
Iron-sulfur cluster-binding protein n=4 Tax=root RepID=B7J7M2_ACIF2
Uncharacterized protein {ECO:0000313|EMBL:CBI05268.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_157_3
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1449..1919)
DNA (471bp) protein (157aa)
hypothetical protein
Uncharacterized protein n=4 Tax=root RepID=E6QDJ3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ACH84389.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_157_4
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1964..2194)
DNA (231bp) protein (77aa)
hypothetical protein
SirA family protein n=4 Tax=root RepID=B5EMQ1_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:ACK78712.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_157_5
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2318..2647)
DNA (330bp) protein (110aa)
rhodanese-like domain-containing protein
Rhodanese domain protein n=3 Tax=Acidithiobacillus RepID=B5EMQ2_ACIF5
Rhodanese-like domain protein {ECO:0000313|EMBL:ACK77889.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_157_6

Not on your lists

comp(2708..3736)
DNA (1029bp) protein (343aa)
moaA; molybdenum cofactor biosynthesis protein A
Cyclic pyranopterin monophosphate synthase n=4 Tax=root RepID=B5EMQ3_ACIF5
Molybdopterin biosynthesis protein A {ECO:0000313|EMBL:CBI05272.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_157_7
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4007..4312
DNA (306bp) protein (102aa)
hypothetical protein
Uncharacterized protein n=4 Tax=root RepID=E6QDJ8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ACK79200.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_157_8
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4316..4825)
DNA (510bp) protein (170aa)
moaC; molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein n=4 Tax=root RepID=B5EMQ5_ACIF5
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_157_9
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5083..6126
DNA (1044bp) protein (348aa)
mreB; rod shape-determining protein MreB
Rod shape-determining protein MreB n=4 Tax=root RepID=B7J7M9_ACIF2
Rod shape-determining protein MreB {ECO:0000313|EMBL:ACK80562.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_157_10
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6150..6989
DNA (840bp) protein (280aa)
mreC; rod shape-determining protein MreC
Cell shape-determining protein MreC n=3 Tax=root RepID=B5EMQ7_ACIF5
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_157_11
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6986..7462
DNA (477bp) protein (159aa)
rod shape-determining protein MreD
Rod shape-determining protein MreD n=4 Tax=root RepID=B5EMQ8_ACIF5
Rod shape-determining protein MreD {ECO:0000313|EMBL:ACH84397.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_157_12
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7459..9267
DNA (1809bp) protein (603aa)
mrdA; penicillin-binding protein 2
Penicillin-binding protein 2 n=4 Tax=root RepID=B5EMQ9_ACIF5
Penicillin-binding protein 2 {ECO:0000313|EMBL:ACH84398.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACH84398.1};; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_157_13
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9264..10358
DNA (1095bp) protein (365aa)
rod shape-determining protein RodA
Rod shape-determining protein RodA n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EMR0_ACIF5
Rod shape-determining protein RodA {ECO:0000313|EMBL:ACH84399.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_157_14
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10501..11667
DNA (1167bp) protein (389aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EMR1_ACIF5
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ACH84400.1}; EC=3.4.16.4 {ECO:0000313|EMBL:ACH84400.1};; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_157_15

Not on your lists

11959..12225
DNA (267bp) protein (89aa)
hypothetical protein
Uncharacterized protein n=3 Tax=root RepID=E6QDK7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI05283.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_157_16
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12222..12860
DNA (639bp) protein (213aa)
lipB; lipoate-protein ligase B
Octanoyltransferase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EMR3_ACIF5
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_157_17

Not on your lists

12863..13816
DNA (954bp) protein (318aa)
lipA; lipoyl synthase
Lipoyl synthase (Lipoic acid synthase) (Lipoate synthase) (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion protein lipA) (Lip-syn) n=1 Tax=mine drainage metagenome RepID=E6QDK9_9ZZZZ
Lipoyl synthase (Lipoic acid synthase) (Lipoate synthase) (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion protein lipA) (Lip-syn) {ECO:0000313|EMBL:CBI05285.1}; EC=2.8.1.- {ECO:0000313|EMBL:CBI05285.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_157_18
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13837..14631
DNA (795bp) protein (265aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EMR5_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:ACH84404.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_157_19

Not on your lists

comp(14662..15747)
DNA (1086bp) protein (362aa)
ErfK/YbiS/YcfS/YnhG family protein
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QDL1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI05287.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_157_20
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15861..16292
DNA (432bp) protein (144aa)
hypothetical protein
Uncharacterized protein n=4 Tax=root RepID=E6QDL2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ACH84406.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_157_21

Not on your lists

16375..17847
DNA (1473bp) protein (491aa)
hypothetical protein
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QDL3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI05289.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_157_22
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17857..19026
DNA (1170bp) protein (390aa)
hypothetical protein
Response regulator receiver protein n=5 Tax=root RepID=B5EMR9_ACIF5
Response regulator receiver protein {ECO:0000313|EMBL:ACH84408.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_157_23
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19086..19652
DNA (567bp) protein (189aa)
small GTP-binding protein
Small GTP-binding protein n=4 Tax=root RepID=B5EMS0_ACIF5
Small GTP-binding protein {ECO:0000313|EMBL:ACH84409.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_157_24

Not on your lists

19649..20287
DNA (639bp) protein (213aa)
hypothetical protein
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QDL7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI05293.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_157_25
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20333..20695
DNA (363bp) protein (121aa)
roadblock/LC7 domain-containing protein
Roadblock/LC7 family protein n=3 Tax=root RepID=B5EMS2_ACIF5
Roadblock/LC7 domain protein {ECO:0000313|EMBL:ACK78369.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_157_26
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20785..21669
DNA (885bp) protein (295aa)
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit n=4 Tax=root RepID=B5EMS3_ACIF5
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_157_27
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21656..23740
DNA (2085bp) protein (695aa)
glyS; glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=3 Tax=Acidithiobacillus ferrooxidans RepID=SYGB_ACIF2
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=920 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (Thiobacillus ferrooxidans).;"
JSantini_Fe4_scaffold_157_28

Not on your lists

23740..24279
DNA (540bp) protein (180aa)
histidinol-phosphate phosphatase domain-containing protein
D,D-heptose 1,7-bisphosphate phosphatase (D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase) n=1 Tax=mine drainage metagenome RepID=E6QDM1_9ZZZZ
D,D-heptose 1,7-bisphosphate phosphatase (D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase) {ECO:0000313|EMBL:CBI05297.1}; EC=3.1.3.- {ECO:0000313|EMBL:CBI05297.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_157_29
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24276..25004
DNA (729bp) protein (243aa)
acyltransferase family protein
Phospholipid/glycerol acyltransferase n=4 Tax=Acidithiobacillus RepID=B5EMS6_ACIF5
Acyltransferase family protein {ECO:0000313|EMBL:ACK80846.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_157_30
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24952..25860)
DNA (909bp) protein (303aa)
alpha-L-glutamate ligase
Alpha-L-glutamate ligase, RimK family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EMS7_ACIF5
Alpha-L-glutamate ligase, RimK family {ECO:0000313|EMBL:ACK79600.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
Displaying items 1-30 of 32 in total

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