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JSantini_Fe4_scaffold_230

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe4_scaffold_230_1
unknown

Not on your lists

comp(1..129)
DNA (129bp) protein (43aa)

This feature has no annotations

JSantini_Fe4_scaffold_230_2
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

283..561
DNA (279bp) protein (93aa)
hypothetical protein
Uncharacterized protein n=2 Tax=root RepID=E6Q8D2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ACH84910.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_230_3

Not on your lists

859..1173
DNA (315bp) protein (105aa)
hypothetical protein
Membrane protein, putative n=3 Tax=root RepID=B7JAM4_ACIF2
Uncharacterized protein {ECO:0000313|EMBL:CBI03457.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_230_4
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1525..3291
DNA (1767bp) protein (589aa)
cysJ; sulfite reductase (NADPH) flavoprotein subunit alpha (EC:1.8.1.2)
Sulfite reductase [NADPH] flavoprotein alpha-component n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EQW1_ACIF5
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRNR000207};; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_230_5

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3281..4972
DNA (1692bp) protein (564aa)
cysI; sulfite reductase (NADPH) hemoprotein subunit beta (EC:1.8.1.2)
Sulfite reductase (Hemoprotein beta-subunit) n=1 Tax=mine drainage metagenome RepID=E6Q8C9_9ZZZZ
Sulfite reductase (Hemoprotein beta-subunit) {ECO:0000313|EMBL:CBI03455.1}; EC=1.8.1.2 {ECO:0000313|EMBL:CBI03455.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_230_6
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4980..5717
DNA (738bp) protein (246aa)
cysH; adenylylsulfate reductase (EC:1.8.4.10)
Adenylylsulfate reductase, thioredoxin dependent n=3 Tax=root RepID=B5EQW3_ACIF5
Adenylylsulfate reductase, thioredoxin dependent {ECO:0000313|EMBL:ACK80857.1}; EC=1.8.4.10 {ECO:0000313|EMBL:ACK80857.1};; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_230_7
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5714..6652
DNA (939bp) protein (313aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase, small subunit n=4 Tax=root RepID=B5EQW4_ACIF5
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_230_8
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6652..8004
DNA (1353bp) protein (451aa)
cysN; sulfate adenylyltransferase, large subunit (EC:2.7.7.4)
Sulfate adenylyltransferase, large subunit n=3 Tax=root RepID=B5EQW5_ACIF5
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_230_9
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8110..8931
DNA (822bp) protein (274aa)
cobA; uroporphyrin-III C-methyltransferase (EC:2.1.1.107)
Uroporphyrin-III C-methyltransferase n=4 Tax=root RepID=B5EQW6_ACIF5
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:ACH84917.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_230_10
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8928..9281
DNA (354bp) protein (118aa)
hypothetical protein
Cobalamin (Vitamin B12) biosynthesis CbiX protein n=4 Tax=root RepID=B5EQW7_ACIF5
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:ACH84918.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_230_11
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9311..9817
DNA (507bp) protein (169aa)
hypothetical protein
Uncharacterized protein n=4 Tax=root RepID=E6Q8C3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ACH84919.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_230_12
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9836..11260)
DNA (1425bp) protein (475aa)
chloride channel core protein
Chloride channel core n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EQW9_ACIF5
Chloride channel core {ECO:0000313|EMBL:ACH84920.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_230_13
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11714..11962)
DNA (249bp) protein (83aa)
twin-arginine translocation protein, TatA/E family
Sec-independent protein translocase protein TatA n=3 Tax=root RepID=B5EQX0_ACIF5
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_230_14
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12396..12623
DNA (228bp) protein (76aa)
hypothetical protein
Putative uncharacterized protein n=3 Tax=Acidithiobacillus RepID=B5EQX1_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:ACH84922.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_230_15
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12684..13502)
DNA (819bp) protein (273aa)
hypothetical protein
Putative uncharacterized protein n=3 Tax=Acidithiobacillus RepID=B5EQX2_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:ACK80719.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_230_16
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14450..15727
DNA (1278bp) protein (426aa)
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EQX6_ACIF5
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_230_17
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15724..16299
DNA (576bp) protein (192aa)
two component Fis family transcriptional regulator
Two component transcriptional regulator, Fis family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EQX7_ACIF5
Two component transcriptional regulator, Fis family {ECO:0000313|EMBL:ACH84928.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_230_18
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16358..16999)
DNA (642bp) protein (214aa)
2OG-Fe(II) oxygenase
2OG-Fe(II) oxygenase n=3 Tax=Acidithiobacillus RepID=B5EQX8_ACIF5
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ACH84929.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_230_19
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17216..17743)
DNA (528bp) protein (176aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EQX9_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:ACH84930.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_230_20
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17858..18295)
DNA (438bp) protein (146aa)
Rrf2 family protein
Transcriptional regulator, BadM/Rrf2 family n=3 Tax=Acidithiobacillus RepID=B5EQY0_ACIF5
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ACH84931.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_230_21
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18310..18486)
DNA (177bp) protein (59aa)
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EQY1_ACIF5
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACH84932.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
Displaying 21 items

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