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JSantini_Fe4_scaffold_399

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe4_scaffold_399_1

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comp(2..145)
DNA (144bp) protein (48aa)
cyoE-1; protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase n=3 Tax=root RepID=B5ENK1_ACIF5
Putative protoheme IX farnesyltransferase {ECO:0000313|EMBL:CBI03788.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
JSantini_Fe4_scaffold_399_2
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(161..1114)
DNA (954bp) protein (318aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XS97_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ACH84934.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_399_3
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1406..1969)
DNA (564bp) protein (188aa)
rus; rusticyanin
Rusticyanin n=6 Tax=Acidithiobacillus ferrooxidans RepID=RUS_ACIF2
Rusticyanin; Flags: Precursor;; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_399_4
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2112..2252)
DNA (141bp) protein (47aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EQY5_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:ACH84936.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_399_5
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2345..2539)
DNA (195bp) protein (65aa)
coxD; cytochrome c oxidase, aa3-type, subunit IV (EC:1.9.3.1)
Cytochrome c oxidase, aa3-type, subunit IV n=4 Tax=Bacteria RepID=B7JAQ1_ACIF2
Sub-unit IV of an aa3-type cytochrome oxidase {ECO:0000313|EMBL:BAC22700.1}; TaxID=920 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (Thiobacillus ferrooxidans).;"
JSantini_Fe4_scaffold_399_6
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2580..3140)
DNA (561bp) protein (187aa)
coxC; cytochrome c oxidase, aa3-type, subunit III (EC:1.9.3.1)
Cytochrome oxidase n=1 Tax=Acidithiobacillus ferrooxidans RepID=Q06DM0_ACIFR
Cytochrome oxidase {ECO:0000313|EMBL:ABI83731.1}; TaxID=920 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (Thiobacillus ferrooxidans).;"
JSantini_Fe4_scaffold_399_7

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comp(3158..5041)
DNA (1884bp) protein (628aa)
coxA; cytochrome c oxidase, aa3-type, subunit I (EC:1.9.3.1)
Sub-unit I of an aa3-type cytochrome oxidase n=1 Tax=uncultured bacterium RepID=F4NC88_9BACT
Sub-unit I of an aa3-type cytochrome oxidase {ECO:0000313|EMBL:CCA63063.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
JSantini_Fe4_scaffold_399_8
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5097..5861)
DNA (765bp) protein (255aa)
coxB; cytochrome c oxidase, aa3-type, subunit II (EC:1.9.3.1)
Cytochrome c oxidase subunit II n=3 Tax=Acidithiobacillus RepID=B5EQY9_ACIF5
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:ACH84940.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_399_9
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5876..6427)
DNA (552bp) protein (184aa)
hypothetical protein
Putative uncharacterized protein n=3 Tax=Bacteria RepID=B5EQZ0_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:ACK78265.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_399_10
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6529..7221)
DNA (693bp) protein (231aa)
cyc1; cytochrome c552
Cytochrome c class I n=3 Tax=Acidithiobacillus RepID=B5EQZ1_ACIF5
Cytochrome c552 {ECO:0000313|EMBL:ACK79877.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_399_11
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7233..8708)
DNA (1476bp) protein (492aa)
cyc2; cytochrome c
Cytochrome c n=1 Tax=Acidithiobacillus ferrooxidans RepID=O33823_ACIFR
Cytochrome c {ECO:0000313|EMBL:CAA07031.1}; Flags: Precursor;; TaxID=920 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (Thiobacillus ferrooxidans).;"
JSantini_Fe4_scaffold_399_12
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9898..10326)
DNA (429bp) protein (143aa)
cytochrome c-like protein
Cytochrome c-like protein n=2 Tax=Acidithiobacillus RepID=B5EQZ4_ACIF5
Cytochrome c-like protein {ECO:0000313|EMBL:ACH84945.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_399_13

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comp(10469..10612)
DNA (144bp) protein (48aa)
ISAtc1-like protein
Transposase of ISCARN2, ISL3 family n=1 Tax=mine drainage metagenome RepID=E6Q8Q5_9ZZZZ
Transposase of ISCARN2, ISL3 family {ECO:0000313|EMBL:CBI06307.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying 13 items

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