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JSantini_Fe4_scaffold_566

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JSantini_Fe4_scaffold_566_1
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..138)
DNA (138bp) protein (46aa)
microcompartments protein
Microcompartments protein n=2 Tax=root RepID=G0JL92_9GAMM
Microcompartments protein {ECO:0000313|EMBL:ACH83615.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_566_2
Acidithiobacillus sp. GGI-221, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(170..436)
DNA (267bp) protein (89aa)
cscB; carboxysome peptide B
Carboxysome peptide B n=5 Tax=Bacteria RepID=B5ERU6_ACIF5
Carboxysome peptide B {ECO:0000313|EMBL:EGQ63437.1}; TaxID=872330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus sp. GGI-221.;"
JSantini_Fe4_scaffold_566_3
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(447..695)
DNA (249bp) protein (83aa)
carboxysome peptide A
Carboxysome peptide A n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JL94_9GAMM
Carboxysome peptide A {ECO:0000313|EMBL:AEM49209.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
JSantini_Fe4_scaffold_566_4
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(692..2287)
DNA (1596bp) protein (532aa)
cab2; carboxysome shell carbonic anhydrase (EC:4.2.1.1)
Carboxysome shell carbonic anhydrase n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) RepID=B7JB27_ACIF2
Carboxysome shell carbonic anhydrase {ECO:0000313|EMBL:ACK80925.1}; EC=4.2.1.1 {ECO:0000313|EMBL:ACK80925.1};; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_566_5
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2343..4649)
DNA (2307bp) protein (769aa)
carboxysome structural protein CsoS2
Carboxysome structural protein CsoS2 n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ERU9_ACIF5
Carboxysome structural protein CsoS2 {ECO:0000313|EMBL:ACH83620.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
JSantini_Fe4_scaffold_566_6
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4720..5052)
DNA (333bp) protein (111aa)
cbbS-2; ribulose bisphosphate carboxylase, small subunit (EC:4.1.1.39)
Ribulose bisphosphate carboxylase small chain n=2 Tax=root RepID=G0JL97_9GAMM
Ribulose bisphosphate carboxylase, small subunit {ECO:0000313|EMBL:ACK77836.1}; EC=4.1.1.39 {ECO:0000313|EMBL:ACK77836.1};; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
JSantini_Fe4_scaffold_566_7
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5144..6565)
DNA (1422bp) protein (474aa)
ribulose bisphosphate carboxylase large chain
Ribulose bisphosphate carboxylase large chain n=2 Tax=root RepID=G0JL98_9GAMM
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
JSantini_Fe4_scaffold_566_8
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6710..7258
DNA (549bp) protein (183aa)
cbbR; rubisco operon transcriptional regulator
RuBisCO operon transcriptional regulator n=1 Tax=Acidithiobacillus ferrooxidans RepID=RBCR_ACIFR
RuBisCO operon transcriptional regulator; TaxID=920 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (Thiobacillus ferrooxidans).;"
Displaying 8 items

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